EST details — SGN-E390443

Search information 
Request: 390443Match: SGN-E390443
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182438Clone name: TUS-39-J4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182438 is on microarray TOM1 spot ID 1-1-5.2.8.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C48278 [cLEI-3-P5] Trace: SGN-T79977 EST: SGN-E266289 Direction: 5' Facility: TIGR
Clone: SGN-C182438 [TUS-39-J4] Trace: SGN-T191545 EST: SGN-E390219 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390443Length: 482 bp (885 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390443 [] (trimmed) ATGGTCGCACCCTGGCTGACTACACATCCAGAAGGAGTCTACCCTCCATCTTGTCCTCCGTCTCCGTGGTGGTATGCAGATTTTTGTTAAGACCC
TCACCGGAAAGACCATCACTTTGGAGGTGGAAAGCTCCGACACCATTGATAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCCTTCAGAC
CAGCAGAGGTTGATTTTCGCTGGTAAGCAGCTCGAGTTTTTTTTTTTTTTTTTTTACTCCTTTTAGCGTCCTCTGAATCAGACCCAGACTCAATC
TTGGATTTTTTTGACTTTTTCTCTTTGGTTTTCTTATCAGTAGGAGTTTCAATATCAGTTTTGGGTGTCTTCTTCTTTTTTTTCTTGGATAGCTC
GGAGGCCATTGTTTCTTCAGTTACAACAAGTGCAGGCATGATGACTTTGTTTGTAGGGGGAATTGCTCTCCTGCCCAAAACGGTGGGGGGGGGGG
GGGGGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390443] SGN-U577265 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191769 [Download][View] Facility Assigned ID: FA0AAD27DE02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5