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EST details — SGN-E390607

Search information 
Request: 390607Match: SGN-E390607
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185362Clone name: TUS-47-C24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185362 is on microarray TOM1 spot ID 1-1-1.3.9.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69931 [cLER-13-A3] Trace: SGN-T94702 EST: SGN-E284008 Direction: 5' Facility: TIGR
Clone: SGN-C185362 [TUS-47-C24] Trace: SGN-T192174 EST: SGN-E390848 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390607Length: 279 bp (840 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390607 [] (trimmed) TGTTAGAGTTGGACTGCCATTGAATTGAAGCATTTTTTCTTTTGACAATAAGTGTTGAGACATAAAAGAATTTGTCGCCATTTCTAGCAAGTCGC
TCTACAATCCTTCTTATGCTAGTATTTATATATTTTTGATTTCATCTGTAGTTGAAACAGGTGTGATAACAAACATACCTGTAGTTGAAATATGT
GTTCCATGTTTGAGATTACCATCCATCTTGAACCCGCGGAGAGTATCCTTGAGCATCAGATGATTTACTATTGATACTCATTTCAATGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390607] SGN-U580370 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191933 [Download][View] Facility Assigned ID: FA0AAD35BB12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5