EST details — SGN-E390626
Search information |
Request: 390626 | Match: SGN-E390626 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C185492 | Clone name: TUS-47-I10 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185492 is on microarray TOM1 spot ID 1-1-7.1.9.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C79152 [cLES-7-P18] | Trace: SGN-T98978 | EST: SGN-E288222 | Direction: 5' | Facility: TIGR |
Clone: SGN-C185492 [TUS-47-I10] | Trace: SGN-T191953 | EST: SGN-E390627 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E390626 | Length: 648 bp (886 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E390626 [] (trimmed)
CAAGTAATGTACATCACACTTCCATTGAACTTAATAAAATAAAACATACATTATTACGATCGGGTTGTAATATAACAAACCTCCAAAGTTCTATT
ACAAGATTTCAATTACAATACTAAAAAAACACACAAAGAAGCTAAAGAGAGAAACAAACACAATCCGTGATTTAAGCAGGATCAATATCGACTTA
ATTATCTTATTCTTGTCCACATAATTGTGCTACTACTATATATTATGATGTGGAAAACAAATCTCTTTCATTAACGTCACTTCACCTTGGAGCAG
TCAACAAAGGGGCTGATCTCAAAAGGAATCTTGACACCACAAACTCCAAAAAGACCAGCAGCTTTACCAAAATCAATGCCTTTAATAGTATTAGC
AGCTTTTTTGACACACTTACATGATTTTCTACGTTCATGTGGTGTCTTACAAAGCTTAAGCAAATCTTTAATGACACCACAACAGCCTCCTATTG
GCCCACGGTTCTGCAAATAAGGAAGGCAATTCACTACCCCAACCTGAATTTGGCCACAAGTCACTGCCTTTGCATGGGGTGCATTTGTAATCAAC
ATGCATAAAACCACCAAACAAGCAATCTTGACAAACATTTTCTTTCTTTAGAAAAGAAATATAATTGAGAGAATAGTG
ACAAGATTTCAATTACAATACTAAAAAAACACACAAAGAAGCTAAAGAGAGAAACAAACACAATCCGTGATTTAAGCAGGATCAATATCGACTTA
ATTATCTTATTCTTGTCCACATAATTGTGCTACTACTATATATTATGATGTGGAAAACAAATCTCTTTCATTAACGTCACTTCACCTTGGAGCAG
TCAACAAAGGGGCTGATCTCAAAAGGAATCTTGACACCACAAACTCCAAAAAGACCAGCAGCTTTACCAAAATCAATGCCTTTAATAGTATTAGC
AGCTTTTTTGACACACTTACATGATTTTCTACGTTCATGTGGTGTCTTACAAAGCTTAAGCAAATCTTTAATGACACCACAACAGCCTCCTATTG
GCCCACGGTTCTGCAAATAAGGAAGGCAATTCACTACCCCAACCTGAATTTGGCCACAAGTCACTGCCTTTGCATGGGGTGCATTTGTAATCAAC
ATGCATAAAACCACCAAACAAGCAATCTTGACAAACATTTTCTTTCTTTAGAAAAGAAATATAATTGAGAGAATAGTG
Unigenes |
Current Unigene builds | |||||
[SGN-E390626] | SGN-U584460 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T191952 [Download][View] | Facility Assigned ID: FA0AAD35BE05FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.942 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 12.5 |