EST details — SGN-E390651
| Search information |
| Request: 390651 | Match: SGN-E390651 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185632 | Clone name: TUS-47-O6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185632 is on microarray TOM1 spot ID 1-1-3.3.9.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C71324 [cLER-17-I2] | Trace: SGN-T95835 | EST: SGN-E282984 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C185632 [TUS-47-O6] | Trace: SGN-T191976 | EST: SGN-E390650 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E390651 | Length: 158 bp (909 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E390651 [] (trimmed)
ATGGGAAGCAAGTATTCTAAGGCAACAAATTCCATAAATGATGCTTTAAGCTCGAGTTATCTCGTTCCTTTTGAAAGTTATCGAGTTCCTTTAGT
AGATTTGGAGGAAGCAACTAAAAGTTTTGATCACAAGTTTTTAATTGGACATGGTGTCCTTGG
AGATTTGGAGGAAGCAACTAAAAGTTTTGATCACAAGTTTTTAATTGGACATGGTGTCCTTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E390651] | SGN-U577094 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191977 [Download][View] | Facility Assigned ID: FA0AAD35BH03RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0103 | Quality Trim Threshold: 14.5 |
Working
