EST details — SGN-E390652
Search information |
Request: 390652 | Match: SGN-E390652 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C185636 | Clone name: TUS-47-O10 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185636 is on microarray TOM1 spot ID 1-1-7.3.9.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C78441 [cLES-5-K6] | Trace: SGN-T98108 | EST: SGN-E285625 | Direction: 5' | Facility: TIGR |
Clone: SGN-C185636 [TUS-47-O10] | Trace: SGN-T192212 | EST: SGN-E390886 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E390652 | Length: 187 bp (894 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E390652 [] (trimmed)
TTTCGCGGCATCCCAGTACCCTCAGATCACTAATTCCGCCGTTGATGATGTTTGCGCAAATTATCTCATTCCTTTTGAAAGTTATCGAGTTCCTT
TAGTAGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACAAGGGTGTTTTGCGA
TAGTAGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACAAGGGTGTTTTGCGA
Unigenes |
Current Unigene builds | |||||
[SGN-E390652] | SGN-U577094 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T191978 [Download][View] | Facility Assigned ID: FA0AAD35BH05RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.954 | Expected Error Rate: 0.0245 | Quality Trim Threshold: 14.5 |