EST details — SGN-E390652
| Search information |
| Request: 390652 | Match: SGN-E390652 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185636 | Clone name: TUS-47-O10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185636 is on microarray TOM1 spot ID 1-1-7.3.9.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C78441 [cLES-5-K6] | Trace: SGN-T98108 | EST: SGN-E285625 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C185636 [TUS-47-O10] | Trace: SGN-T192212 | EST: SGN-E390886 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E390652 | Length: 187 bp (894 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E390652 [] (trimmed)
TTTCGCGGCATCCCAGTACCCTCAGATCACTAATTCCGCCGTTGATGATGTTTGCGCAAATTATCTCATTCCTTTTGAAAGTTATCGAGTTCCTT
TAGTAGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACAAGGGTGTTTTGCGA
TAGTAGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACAAGGGTGTTTTGCGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E390652] | SGN-U577094 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191978 [Download][View] | Facility Assigned ID: FA0AAD35BH05RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0245 | Quality Trim Threshold: 14.5 |
Working
