EST details — SGN-E390742

Search information 
Request: 390742Match: SGN-E390742
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185443Clone name: TUS-47-G9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185443 is on microarray TOM1 spot ID 1-1-8.3.9.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77899 [cLES-3-K15] Trace: SGN-T97532 EST: SGN-E284511 Direction: 5' Facility: TIGR
Clone: SGN-C185443 [TUS-47-G9] Trace: SGN-T192584 EST: SGN-E391258 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390742Length: 661 bp (922 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390742 [] (trimmed) GTTTCTCTCTCTTACCATAGCTCAGAAGCTCGACCATGGCCGTCGGTAAGAACAAGCGAATTTCCAAAGGCAAAAAAGGAGGGAAGAAGAAGGCA
GCTGATCCATATGCTAAAAAGGATTGGTATGATATCAAGGCTCCATCAGTATTTGGTGTCCGCAATGTAGGGAAGACCCTTGTTACCCGTACACA
GGGTACAAAGATTGCTTCAGAAGGCCTGAAGCATCGTGTGTTCGAAGTGTCATTGGCTGATCTTCAGAATGACGAAGATCACTCCTTCAGGAAGA
TTCGTCTGAGAGCTGAAGACGTCCAAGGAAGAAATGTCTTGACAAACTTTCACGGTATGGATTTCACCACAGATAAATTGAGGTCACTGGTAAAG
AAATGGCAATCATTGATTGAGGCTCATGTTGACGTTAAGACAACTGATAGCTACACCTTGAGAATGTTCTGCATTGGCTTTACCAAAAAGCGTCC
AAACCAACAAAAAAGAACCTGCTACGCGCAGTCAAGCCAGATTCGCCAGATTCGTCGCAAGATGCGTGAGATCATGGTTAACCAGGCACAATCGT
GTGATTTGAAAAACTTGGCCCTGAAGTTCATTCCTGAATCAATCGGTAGAGAGATTGAAAAGGCAACTTTCAGCATCTACCCTTTGCAGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390742] SGN-U580590 Tomato 200607 Build 2 97 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192068 [Download][View] Facility Assigned ID: FA0AAD35AD05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0016 Quality Trim Threshold: 14.5