EST details — SGN-E390803
Search information |
Request: 390803 | Match: SGN-E390803 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C184379 | Clone name: TUS-44-K1 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184379 is on microarray TOM1 spot ID 1-1-8.3.16.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C15496 [cLED-13-B22] | Trace: SGN-T51898 | EST: SGN-E236620 | Direction: 5' | Facility: TIGR |
Clone: SGN-C184379 [TUS-44-K1] | Trace: SGN-T197596 | EST: SGN-E396270 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E390803 | Length: 578 bp (858 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E390803 [] (trimmed)
CCAGGATAAAAAATACCCTAAAAACCCCCATCTTTTGGCCAGCCAAACAAAAAGGTTTAACTTATATCCCTTTCACAAGGAATCTTTAACCCACC
CCAACTACGGCCCCAAAATTGCAAAAATCTAAATTTGCTTCCCAAGGCCCATATAACCAAACAATTTACATGAACAAGTGGGGCTTAAAACCCTT
GAAGGGGGCCTTGATTTCCCAAAAGGGGGGCCGGACTTTCTTGAACCCCAGGGGAAACTTGATCTTGGAGCCAGGGAACTGCTTTGGCCCCCCCC
CCTGGCACAGCTAACCCGAAAGGGTGGCGGCCTTTATAATCGGAATGCAGGGAGGGCAAACTCGGGGGCAAAAACCCATCCCAAGGAACTTCTGC
CCCCCCCCCCCTTTCAAGGGGGGGCCACGGAACCCCTTGAACATGTGGGGGTACCCCGTTCAACCCGGGAAACGAACCCAAAAACCAAAATTCTT
AATTGTGGTGGGGTCCTTCCCAAAAATCCCATTAAAACCCAGCATCGGACCGTTGCTCTTCTTCACCTTCTAAACCTTCCCCAAAAAATACCAAA
ATTTGGAC
CCAACTACGGCCCCAAAATTGCAAAAATCTAAATTTGCTTCCCAAGGCCCATATAACCAAACAATTTACATGAACAAGTGGGGCTTAAAACCCTT
GAAGGGGGCCTTGATTTCCCAAAAGGGGGGCCGGACTTTCTTGAACCCCAGGGGAAACTTGATCTTGGAGCCAGGGAACTGCTTTGGCCCCCCCC
CCTGGCACAGCTAACCCGAAAGGGTGGCGGCCTTTATAATCGGAATGCAGGGAGGGCAAACTCGGGGGCAAAAACCCATCCCAAGGAACTTCTGC
CCCCCCCCCCCTTTCAAGGGGGGGCCACGGAACCCCTTGAACATGTGGGGGTACCCCGTTCAACCCGGGAAACGAACCCAAAAACCAAAATTCTT
AATTGTGGTGGGGTCCTTCCCAAAAATCCCATTAAAACCCAGCATCGGACCGTTGCTCTTCTTCACCTTCTAAACCTTCCCCAAAAAATACCAAA
ATTTGGAC
Unigenes |
Current Unigene builds | |||||
[SGN-E390803] | SGN-U592977 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T192129 [Download][View] | Facility Assigned ID: FA0AAD32AF01FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.918 | Expected Error Rate: 0.0271 | Quality Trim Threshold: 14.5 |