EST details — SGN-E390865
Search information |
Request: 390865 | Match: SGN-E390865 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C185490 | Clone name: TUS-47-I8 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185490 is on microarray TOM1 spot ID 1-1-1.1.10.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C79094 [cLES-7-M16] | Trace: SGN-T98904 | EST: SGN-E288148 | Direction: 5' | Facility: TIGR |
Clone: SGN-C185490 [TUS-47-I8] | Trace: SGN-T191951 | EST: SGN-E390625 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E390865 | Length: 602 bp (869 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E390865 [] (trimmed)
AGATGATCACTCAAATTTATTTGCACATATATACTAGAGTTACAGTTTTATACAAATTATTGCAAAACCAAAATAAAACCGAAAGAGATACACAA
AGAAACTAAAATCCATCGACATCTTCTCCAAAGCGACCAGGGGAGGAGCCACCTTGAACCAAGAGGGTTCATTCGAATCCCCTTCGGCGAAAAAT
TATATTACTTATACATGGTTAAAATAATTTTTTATGTATATATAGTAGATGTTAAACCCCCTTTATCGAGTTTGAACCCTCTTCTTGAAAATTCT
GATTTCGCCTCTAAAAAAAGGATTCTTTAAAACCTTGAACTCTAAAATCAAGATCCTGGCCGGTGAGTCTAGCCTGGTTTCACTGCATCGCCGGA
GCTGCTGGCTGCACCGCCTCGCTAGTTCTCTCCAATTACTGTTGCTTACTGTCGTTGGAGATTCTGTTATTCTCCTCACCTGGCCTGGAGAAGAG
AGGAGAGAGGAGAAGGTGGAAGAGCGAGGGTAAAGGGAAAGGGTCAGGCGAGAGAGGAGAAAGAGGACGGCGTCGGACACATTTCGCCGGAGCTC
GTCGTGGAGAAAAAAGATAACGGCGCTGCTGC
AGAAACTAAAATCCATCGACATCTTCTCCAAAGCGACCAGGGGAGGAGCCACCTTGAACCAAGAGGGTTCATTCGAATCCCCTTCGGCGAAAAAT
TATATTACTTATACATGGTTAAAATAATTTTTTATGTATATATAGTAGATGTTAAACCCCCTTTATCGAGTTTGAACCCTCTTCTTGAAAATTCT
GATTTCGCCTCTAAAAAAAGGATTCTTTAAAACCTTGAACTCTAAAATCAAGATCCTGGCCGGTGAGTCTAGCCTGGTTTCACTGCATCGCCGGA
GCTGCTGGCTGCACCGCCTCGCTAGTTCTCTCCAATTACTGTTGCTTACTGTCGTTGGAGATTCTGTTATTCTCCTCACCTGGCCTGGAGAAGAG
AGGAGAGAGGAGAAGGTGGAAGAGCGAGGGTAAAGGGAAAGGGTCAGGCGAGAGAGGAGAAAGAGGACGGCGTCGGACACATTTCGCCGGAGCTC
GTCGTGGAGAAAAAAGATAACGGCGCTGCTGC
Unigenes |
Current Unigene builds | |||||
[SGN-E390865] | SGN-U575448 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T192191 [Download][View] | Facility Assigned ID: FA0AAD35BE04FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 12.5 |