EST details — SGN-E390905

Search information 
Request: 390905Match: SGN-E390905
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185335Clone name: TUS-47-B21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185335 is on microarray TOM1 spot ID 1-1-4.2.9.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C74082 [cLER-7-L1] Trace: SGN-T93610 EST: SGN-E281147 Direction: 5' Facility: TIGR
Clone: SGN-C185335 [TUS-47-B21] Trace: SGN-T192232 EST: SGN-E390906 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390905Length: 744 bp (818 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390905 [] (trimmed) AGAGTATATGGTATCTATCTATCAAATCTCCTCGGGGAAAAACATCATCCAGTCATGACAGCAAATAAATGCTTAGAAAGGATTACAATGTACAA
CTCAACATAATACACCAACAGAAGAAAATGCATTCAGGTTCAGTATCTATCATTCATCAGTCTTCACCGACACCAGGCTTGTGTAAATGCACTGT
TACTCCTCGTCACTTTCATTGCTGAAGACAGATGCAACAGTTACTACACGCACTGTTACTCCTCGTCACTTTCATTGCTGAAGACAGATGCAACA
GTTACTTTTGGCTTCTTTGCAGATTTGTTAACCAAGGTCGTCACCTTTGATGAGCCTCCTTTCGCAAAAAATCCGAACTTCAAAGTCTTCCTCTG
ATCTTGATCTGCTAGAGCAGTTGCAGTTCTAACCATGGAAGGGGCTGGAATATTTCCTGCTTCCTCTGGTGTTTGCTGTTCTTGCTGCTTCTTAT
TGGCAGCCATTTGGGCGAATTTTGCCATCTCCCTCTCTTGACGTTGCTGTTCTCTTTTATGTCTATCGTCCCGGCTACTTCCATGCATTTCTCTC
ATTTCCTTGAAGCGCTTCCTGTGATTGTGATCATATGAACTTAGGTGAGCTTCAAACTCCATTGCTAATTTATATTGCTTGTTGCACAGCTCACA
AAAGAAAGTCTTGCGTATTTCCTTCACGTCCGTTTCAATTTTGTGCTCGCGTTCTGCTAAAACCTGGATTTTCATAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390905] SGN-U580256 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192231 [Download][View] Facility Assigned ID: FA0AAD35CA11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0059 Quality Trim Threshold: 14.5