EST details — SGN-E391009

Search information 
Request: 391009Match: SGN-E391009
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185459Clone name: TUS-47-H1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185459 is on microarray TOM1 spot ID 1-1-8.4.10.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78282 [cLES-5-C8] Trace: SGN-T98083 EST: SGN-E285600 Direction: 5' Facility: TIGR
Clone: SGN-C185459 [TUS-47-H1] Trace: SGN-T197768 EST: SGN-E396442 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391009Length: 669 bp (901 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391009 [] (trimmed) CAAATATTTTGCCCCCTTCCATTTCTTAATTTATTTTCCTCTTTCCCATCTTCTTATTTTCCAACTTTCTTCCAATGGCCAGTGTTGAGGTTGAA
TCTGCACCAGTAGCACCAGTAGAGACTACTCCAGCTGAGGTTGAAGTTACCCCAGCTCCAGAGGTAAACAAGGCGGAGGAACCAGCCCCCGCTGT
AGAAAAGGATGTTGAGGTCGAATCAGCACCAGCACCAGAAGAGGCTGCTCCTGCTGCGGAGGAAGTAGCAGCCCCTGTAGCTGAAGAGCCTGCGG
CTGCAGAACCTGTAGCCGCAGAATCAGAAGAGCCAGTGGCAGTTGCAGCAGAACCTGTTGCAGCTCCAGTTGAAGAACCTGTGGCTGCAGAAGAA
CCTGCAGCCGCAGCTGAGGAACCGGTTGCTGCAGCACCCGTTGAGGAGGCTCCAGCACCCGTAGCTGAACCCGAAGCAGCCCCAGTTGCAGAACC
CGAAGCAGAGAAAACAGAGGAATCTGCCCCTGCATCTGAGGAGCCAGAGAAAGTTGAAGAGTAAAATTCAAATGGTTGATGAATGATGGTTTTTT
TTTTTTTTATATTGAAATTTGGTTGTGTTTATTGTGTTTTTTAGTTGAGAATTTTATTTACTGCTACTATTATTTATTTACTAAAACTAAAATTT
TAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391009] SGN-U581194 Tomato 200607 Build 2 457 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192335 [Download][View] Facility Assigned ID: FA0AAD35CD01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0060 Quality Trim Threshold: 14.5