EST details — SGN-E391023

Search information 
Request: 391023Match: SGN-E391023
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185517Clone name: TUS-47-J11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185517 is on microarray TOM1 spot ID 1-1-6.2.9.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C74950 [cLES-12-D19] Trace: SGN-T100167 EST: SGN-E286636 Direction: 5' Facility: TIGR
Clone: SGN-C185517 [TUS-47-J11] Trace: SGN-T192348 EST: SGN-E391022 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E391023Length: 542 bp (910 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391023 [] (trimmed) ATCAAAGGGGATGGCGCCGCCGATCACAGGATTAGCAGTGGGATTGAACAAAGGACACATTGTAACCAAGAAGGAGTTAGCTCCACGCCCTTCTG
ACAGAAAAGGGAAAACCAGCAAAAGAATCCACTTCGTCAGGAGCCTCATCAGAGAAGTTGCTGGATTTGCTCCATATGAGAAGAGGATTACTGAG
CTTCTTAAAGTTGGTAAGGACAAGCGTGCATTGAAGGTAGCCAAGAGGAAGTTGGGTACCCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGTC
CAGCGTTCTCCGTAAGATGAGGGCAACCGGTGGTGGTGAAAAGAAGAAGTGAAGTCTCTATCCTTATTTTGACAATTGAGGAACTGAGTTTATTA
GTTAATACATGATCTTTTTGAGTTAGCTATAAAATTCTCTAAACTTTGACACAATTATGGCTTTGAATTTTCATTGAGATTGTGACATTTTGCTC
AAACAAGTCTACATTTTAGTTATGCTCTGTATTTTACATTTTTGTTAAATTGTTGATCCTTGTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391023] SGN-U580851 Tomato 200607 Build 2 70 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192349 [Download][View] Facility Assigned ID: FA0AAD35CE06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0064 Quality Trim Threshold: 12.5