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EST details — SGN-E391042

Search information 
Request: 391042Match: SGN-E391042
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185625Clone name: TUS-47-N23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185625 is on microarray TOM1 spot ID 1-1-2.2.9.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C19994 [cLED-28-N24] Trace: SGN-T56039 EST: SGN-E241561 Direction: 5' Facility: TIGR
Clone: SGN-C185625 [TUS-47-N23] Trace: SGN-T192369 EST: SGN-E391043 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391042Length: 756 bp (818 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391042 [] (trimmed) GGGAAACCAAAAAAGAAAAGAACTTCATTAATTTACTACTAGCAAACAACAAACCTCCTAAATGTAAAGGGTAGGTATTAAGTTCTCAAGGAAGT
TGGTTAAAGTGAAAGCAAAGTAAAGGCTGAAAGTAATAATTACAGCAACCATTATCCAACCAACAAGAACAAATGGTACAGAGAATGGCCCCCCC
ACACAAAGGAAAATGAAAAGGGCTCTAGCTCAACTACAATGGAGAACTGAGAAAAAGGAAAGGGCATAAAATTGTTAAAATTTAAATGAAAGAAG
ATAGGCCCTACTAACCAACAGAAAGCATTAATAAAGTTAAATATGCTTAAATGGGATTCTGTAAATTGGTGATGGTGCTTCTTTAGTTCAAGTAC
TGCTGCACATGTAAAAGGACTAAGGACCACCTCAATCAGATTCATTGACAGAATCAGACTGTTCTTGAGTAACCCGCAAGCTTGAGAGACGCAGC
TCTTGAATTCGCTCAACGACATCAGACATAGAAGGTCTGTTGTCGGGATATTGAGTCGAGCAATCTATTGCGAGCTGCAAGAGTTGCACCATTTC
TTCCTCAACGCTTTGGTACCTGAGGAGCTCAATATCAAAAACTTGTGAAGTCCATTGGTCTTGAACGATAGACTGCACCCATCTTGGCAAGTCAA
CACCTTCCTCGTTCAGGAGGGCATGAGTGGGTGCCTTCCCAGTAAGAAACTCAAGAAGCAATACACCAAAGCTATATACATCTGCCTTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391042] SGN-U590757 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192368 [Download][View] Facility Assigned ID: FA0AAD35CG12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0027 Quality Trim Threshold: 14.5