EST details — SGN-E391126

Search information 
Request: 391126Match: SGN-E391126
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185318Clone name: TUS-47-B4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185318 is on microarray TOM1 spot ID 1-1-5.2.10.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73407 [cLER-4-K18] Trace: SGN-T92933 EST: SGN-E278100 Direction: 5' Facility: TIGR
Clone: SGN-C185318 [TUS-47-B4] Trace: SGN-T192646 EST: SGN-E391320 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E391126Length: 595 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391126 [] (trimmed) AAATTTCAAATTTGCTTTTGCGGAAGTAATTAAAATTTCGATTTCTTCCGCTGCAACTTCAATTCAATTTTGATTGATTGATCTTCTTCTATTCT
CAGCAATATCAATTACAATGGCTCGTTATTTATCCAACTGCAAAAATATCTCTGCTTTTGTTGTAGACTCTGTTTCTGTAGCTATCCAGAGGCGT
GGATACGCGGCCACGGCAGCACAGGGTGGTGTTTCTGGTAGTGTAAGAGGTAGTGGGAGTGTTAGAAGCAATGTGATGGAATCAAACAAGACTTC
ATGGGTACCAGATCCTGTTACTGGTTATTACAGACCAGAAACTCATGCTAAGGAAATTGATGCTGCTGAACTTAGAAACATGTTGTTGAAGTACA
AACCTAGACAAAATTGAAAAAAAAAAAAGAACAAATTAGAGGATCAAGAATCACGTTTCGATGAGTAGAGACGAATTAGGATTTGGATATTGAAG
TTCAATAGTAGAAATATTGTAATTTCTCACATATTATGTTTGTTTTTCGCATAAGGAAAATGTTGAATTCAGTTGAATACGTTGGACATGTATTA
CATATTAGATTTTCACTTTTTGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391126] SGN-U580543 Tomato 200607 Build 2 65 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192452 [Download][View] Facility Assigned ID: FA0AAD35DA02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0035 Quality Trim Threshold: 12.5