EST details — SGN-E391131
Search information |
Request: 391131 | Match: SGN-E391131 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C185330 | Clone name: TUS-47-B16 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185330 is on microarray TOM1 spot ID 1-1-1.2.9.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C73891 [cLER-6-M6] | Trace: SGN-T93320 | EST: SGN-E277590 | Direction: 5' | Facility: TIGR |
Clone: SGN-C185330 [TUS-47-B16] | Trace: SGN-T192458 | EST: SGN-E391132 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E391131 | Length: 689 bp (879 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E391131 [] (trimmed)
ACACAATTAAACTTTCAGTACATTCATGAAGAGTAAAGGTCCTTAATTAGACGTACAAAACCACACCTATATACAGATTAAGAAGAAGTACATGC
TCAAAAAGTTCAAGCTTATGTAGTTGAGCAGTTCTTTTTATGCATCGCAGCTCAAACTGTCGATGAATCAAGACTCGATATTTATTGAAAGCAGG
GGAAAAAGATAAGTTACAAAAAGCTCTAACATAAAGCTCACATAACTTCTTCCATAGCAGCTGTGGCAGCTTCAGGATGGTAATGAAGTATTTCC
GTCCACATCATGTCCCTTATCGTCTCTTCTCCCAAGTCCTCGTCTATGTCAAGGTTGATAGGAACCTGCGCTGGGGGATCAGTGTTCGGATCATA
CAAAGGAGACATGTATGGGTGTTGAAGTGCTTCCATAACACTAATTCTTTTGGAAGGGTCAAACACAAGCATCCTCTGCAGGAGATCAATCGCCA
ATGGATGAGCTTGGGGATAGAGGCGGGAAAATGGTGTTCCAGGAGAATATGGAAGTGATTTGATGTACTTCCTTGCCTTTGGATTGTCGATAAAT
TCTAAATCTTCTTCCCTTTGGCTACCAAGGATGTTGATAATCAATTTCAGTTGGTTCAGGCATTCCGTACCTGGAAAGACAGGTTTCCTCCCTAA
GAGCTCCGCNAAAATGCAACCAAC
TCAAAAAGTTCAAGCTTATGTAGTTGAGCAGTTCTTTTTATGCATCGCAGCTCAAACTGTCGATGAATCAAGACTCGATATTTATTGAAAGCAGG
GGAAAAAGATAAGTTACAAAAAGCTCTAACATAAAGCTCACATAACTTCTTCCATAGCAGCTGTGGCAGCTTCAGGATGGTAATGAAGTATTTCC
GTCCACATCATGTCCCTTATCGTCTCTTCTCCCAAGTCCTCGTCTATGTCAAGGTTGATAGGAACCTGCGCTGGGGGATCAGTGTTCGGATCATA
CAAAGGAGACATGTATGGGTGTTGAAGTGCTTCCATAACACTAATTCTTTTGGAAGGGTCAAACACAAGCATCCTCTGCAGGAGATCAATCGCCA
ATGGATGAGCTTGGGGATAGAGGCGGGAAAATGGTGTTCCAGGAGAATATGGAAGTGATTTGATGTACTTCCTTGCCTTTGGATTGTCGATAAAT
TCTAAATCTTCTTCCCTTTGGCTACCAAGGATGTTGATAATCAATTTCAGTTGGTTCAGGCATTCCGTACCTGGAAAGACAGGTTTCCTCCCTAA
GAGCTCCGCNAAAATGCAACCAAC
Unigenes |
Current Unigene builds | |||||
[SGN-E391131] | SGN-U577288 | Tomato 200607 | Build 2 | 44 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T192457 [Download][View] | Facility Assigned ID: FA0AAD35DA08FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.974 | Expected Error Rate: 0.0010 | Quality Trim Threshold: 14.5 |