EST details — SGN-E391135

Search information 
Request: 391135Match: SGN-E391135
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185364Clone name: TUS-47-D2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185364 is on microarray TOM1 spot ID 1-1-7.4.10.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70005 [cLER-13-E21] Trace: SGN-T94718 EST: SGN-E284024 Direction: 5' Facility: TIGR
Clone: SGN-C185364 [TUS-47-D2] Trace: SGN-T192462 EST: SGN-E391136 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E391135Length: 676 bp (902 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391135 [] (trimmed) AGACAAAATTTTCATTTAGCTCCAATTTCAGCTAGTGCTTTAGCTTTGAAAAAACTAAGCATCATATCTCTATCAGGAAGATTTTCTTGAACTTC
ACTACACTTGAGATACTTATCTATCCAAGCACACAAATTAGGAAACTTTTCACTTGTAATCAACACATTTCCAGTAGCTTCTTCAACAATTTCAA
CCCAAAATGGGATGTAATTTGCAGCAACATCAACAAATCCAATTTTATCTCCACTAAAAAACTTCTTGTCCTTAAGTTCATTGTCAACAATTTTT
AGCATCTCATAAGCTTCTTCTTGTATGTTTTTCTCTTTTTCCTCTCTTTTGCTCCATAGACCTTTCCTCACTGCATCCAAGCACATTCCATCAAG
AAACGTAGCCCAGAAACGTGCAATAGCTCGATCATAAGGGTCTTTAGGCAAAATGGACGGGCCTTCAAATGTCTCATCAATGTATTCAACAATCA
CCATAGACTCACAAATGGACTTTCCATTGTGAATTAGTACTGGGATTTTCTTAAGGACGGGATTCGATTCAAGAAGTAGAGGGCTTTTGTTTTGT
AGATCTTCTTCTATAAATTCATATTTCACTCCTTTAACTCTCAAAGCCCATTCAACTCGACGACTATAAGAACTGCCACTAACACCAAGCAACTT
AACTTCATCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391135] SGN-U578214 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192461 [Download][View] Facility Assigned ID: FA0AAD35DB01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0066 Quality Trim Threshold: 12.5