EST details — SGN-E391195

Search information 
Request: 391195Match: SGN-E391195
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185721Clone name: TUS-48-B23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185721 is on microarray TOM1 spot ID 1-1-2.2.7.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185721 [TUS-48-B23] Trace: SGN-T192522 EST: SGN-E391196 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E391195Length: 672 bp (850 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391195 [] (trimmed) AATTTCTAAGGTAAATTCATTTAATAAGGAAAAAGTTTACATAGGATAAGGAGAAAATTACACAAAGATTGAACCATAACTTTCTCCACAACTAG
TAAATTACACCAAAAATTTACATTAATTTAACATACCATCCGACAAACTTTATTACTAAAACAACAAACTGAAAAGACAAAAAGTCTTCAAGCAA
CGCAGTATGGCCAAAACTCTTCCTCCCCTATTGCACATTCTGCGCCAACACCAACAATATTCTCATCATTGCAATAGTAATACCCAGAAAAACAG
CAGGATGAATGTGGTGCAAGATATGGCATGTTGTGGAACGACTGATTTAGGCTATTGGCCAATGAGACTTCTACTTCTTCTTCCTTGTGCACGAA
TTCCTCTGCACGGTGCTTGAGGGTCTCGAACATGAGTTCAGGCTCGTGTTGCATTGCTCGGAGGACGTCAGCACAGGAAGGCCCAGGGACTGCAT
AGGTTACAGCGAAGCTGTGAGGGCTGTCGCTCTGTGACACACGCAGGACGCTTGGTCCGCCAAATAGGTTATGGAGTCCGCCGAGGGCTTCCTCA
TATGCCCCGCCTAAAAACATTCCCAGATAATAAGGTGCGCTGTTTCCACTTCCCAATTCATGGAGAGCCAAGCTTGACTCGCCTCCGATGAATTT
ATCGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391195] SGN-U578741 Tomato 200607 Build 2 159 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192521 [Download][View] Facility Assigned ID: FA0AAD36CA12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5