EST details — SGN-E391197
Search information |
Request: 391197 | Match: SGN-E391197 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C185747 | Clone name: TUS-48-D1 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185747 is on microarray TOM1 spot ID 1-1-8.4.7.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185747 [TUS-48-D1] | Trace: SGN-T192524 | EST: SGN-E391198 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E391197 | Length: 645 bp (899 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E391197 [] (trimmed)
GCATAGAGAATGGAAGATATTACTTGGATAAATTATAAGAAACTGATATACATACATTACAAGTTTCAGAAGCAGATTAGTATTAAAACAAATGC
CATTAATTCAAAAGATGAAGGGAACACAACAAAGTAAAATTACTACAGTTTCTCCAGAGAAAAACTTTAAGGAGGATTCAAACAAGCTTCCCCTA
AATACATAGGGTCAGTTATACATTACATAATTAAAAATTGGCATTTTAGTATCCTTCGGGCTTGTAAGCGATGAAACTGATGCACTGCACTTGAC
GAACATTGTCGAATCCGATGATACGGACCCATGCCTGAGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCTGGGTTGCATCAGTGCAC
CCAAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCACGGTACACAAATCCGTGCTCAGTCTC
GAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGGAAGGTACGACAGAGTCT
CGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACATTACCTCCATTGCTAGCAACGGTGCCTG
CATTAATTCAAAAGATGAAGGGAACACAACAAAGTAAAATTACTACAGTTTCTCCAGAGAAAAACTTTAAGGAGGATTCAAACAAGCTTCCCCTA
AATACATAGGGTCAGTTATACATTACATAATTAAAAATTGGCATTTTAGTATCCTTCGGGCTTGTAAGCGATGAAACTGATGCACTGCACTTGAC
GAACATTGTCGAATCCGATGATACGGACCCATGCCTGAGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCTGGGTTGCATCAGTGCAC
CCAAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCACGGTACACAAATCCGTGCTCAGTCTC
GAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGGAAGGTACGACAGAGTCT
CGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACATTACCTCCATTGCTAGCAACGGTGCCTG
Unigenes |
Current Unigene builds | |||||
[SGN-E391197] | SGN-U578438 | Tomato 200607 | Build 2 | 819 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T192523 [Download][View] | Facility Assigned ID: FA0AAD36CB01FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0113 | Quality Trim Threshold: 12.5 |