EST details — SGN-E391320

Search information 
Request: 391320Match: SGN-E391320
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185318Clone name: TUS-47-B4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185318 is on microarray TOM1 spot ID 1-1-5.2.10.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73407 [cLER-4-K18] Trace: SGN-T92933 EST: SGN-E278100 Direction: 5' Facility: TIGR
Clone: SGN-C185318 [TUS-47-B4] Trace: SGN-T192452 EST: SGN-E391126 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E391320Length: 594 bp (887 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391320 [] (trimmed) ATCAAAACCTTTTAATCTAATATGTAATACATGTCCAACGTATTCAACTCATTTCAACATTTTCCTTATGCGAAAAACAAACATAATATGTGAGA
AATTACAATATTTCTACTATTGAACTTCAATATCCAAATCCTAATTCGTCTCTACTCATCGAAACGTGATTCTTGATCCTCTAATTTGTTCTTTT
TTTTTTTTCAATTTTGTCTAGGTTTGTACTTCAACAACATGTTTCTAAGTTCAGCAGCATCAATTTCCTTAGCATGAGTTTCTGGTCTGTAATAA
CCAGTAACAGGATCTGGTACCCATGAAGTCTTGTTTGATTCCATCACATTGCTTCTAACACTCCCACTACCTCTTACACTACCAAAAACACCACC
CTGTGCTGCCGTGGCCGCGTATCCACGCCTCTGGATAGCTACAGAAACAGAGTCTACAACAAAAGCAGAGATATTTTTGCAGTTGGATAAATAAC
GAGCCATTGTAATTGATATTGCTGAGAATAGAAAAAGATCAATCAATCAAAATTGAATTGAAGTTGCAGCGGAAGAAATCGAAATTTTAATTACT
TCCGCAGCAACAAATTTGAAATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391320] SGN-U580543 Tomato 200607 Build 2 65 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192646 [Download][View] Facility Assigned ID: FA0AAD35DA02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.930 Expected Error Rate: 0.0040 Quality Trim Threshold: 12.5