EST details — SGN-E391324
Search information |
Request: 391324 | Match: SGN-E391324 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C185332 | Clone name: TUS-47-B18 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185332 is on microarray TOM1 spot ID 1-1-7.2.9.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C73996 [cLER-7-F9] | Trace: SGN-T93594 | EST: SGN-E281131 | Direction: 5' | Facility: TIGR |
Clone: SGN-C185332 [TUS-47-B18] | Trace: SGN-T197686 | EST: SGN-E396360 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E391324 | Length: 767 bp (881 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E391324 [] (trimmed)
AATCCCACTGAACCATTTCACTAGACATTAAAATATGAAATACATCAACAGTTGGTAGCAGTATAGAGATTGTTTTACACACATACCTTAACTCA
GTAATAACCTACATACACCATATTTTTGCTTAGAGTTACAACTTTGGACACACTGTAAGTACACCAATAAACAAGGTTCAGGGGAATTTGTTAAA
CGTCCACTAAAGTGGCGCTTCTTCTGAAGCTATTCATCAAGCTTCTAAGAGCAGTTGGTGTCGTAGGTAGCGAGTCCCAACAACTCCGGACCTTC
AAGTCGAGGATTGTGCTCGAAATTGTTTAGAGGAATATGCTCAAATGGACCAGAAGTAGGAATTGTTCCACACAAATCATTATTCGAGACATCCA
CAACTTTCAGGCTAGAAATGCTAGTAAGTTCTCTTGGGATTGGTCCTGTTAGCTTGTTATCATTTAGACGCAAGAAAACAAGGTTTTTCAGGTTT
CCAAGTGAAGTAGGAATTGTCCCCGAAATATTGTTGTTGTACAGATCCAGACTAATAAGGCTCTTCAAGTTACCGAGCTCCTTAGGGATGGTTCC
CTGAATATTATTTTTGTAAAGCTCCAGATACTGTAGATGTTCAAGCTTTCCGAGCTCAGGTACCAAATGACCAGATAACTTTGAGTTCCCAAGAT
CCACACGAGTAACTTGATTATCTCCGTTGCAAGTGACATGAAACCAGGTACAAGGGTTAACAAGATTTGGATCCCAGCTCTGTAACACGTTAACC
GGGGTCA
GTAATAACCTACATACACCATATTTTTGCTTAGAGTTACAACTTTGGACACACTGTAAGTACACCAATAAACAAGGTTCAGGGGAATTTGTTAAA
CGTCCACTAAAGTGGCGCTTCTTCTGAAGCTATTCATCAAGCTTCTAAGAGCAGTTGGTGTCGTAGGTAGCGAGTCCCAACAACTCCGGACCTTC
AAGTCGAGGATTGTGCTCGAAATTGTTTAGAGGAATATGCTCAAATGGACCAGAAGTAGGAATTGTTCCACACAAATCATTATTCGAGACATCCA
CAACTTTCAGGCTAGAAATGCTAGTAAGTTCTCTTGGGATTGGTCCTGTTAGCTTGTTATCATTTAGACGCAAGAAAACAAGGTTTTTCAGGTTT
CCAAGTGAAGTAGGAATTGTCCCCGAAATATTGTTGTTGTACAGATCCAGACTAATAAGGCTCTTCAAGTTACCGAGCTCCTTAGGGATGGTTCC
CTGAATATTATTTTTGTAAAGCTCCAGATACTGTAGATGTTCAAGCTTTCCGAGCTCAGGTACCAAATGACCAGATAACTTTGAGTTCCCAAGAT
CCACACGAGTAACTTGATTATCTCCGTTGCAAGTGACATGAAACCAGGTACAAGGGTTAACAAGATTTGGATCCCAGCTCTGTAACACGTTAACC
GGGGTCA
Unigenes |
Current Unigene builds | |||||
[SGN-E391324] | SGN-U583216 | Tomato 200607 | Build 2 | 165 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T192650 [Download][View] | Facility Assigned ID: FA0AAD35DA09FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0025 | Quality Trim Threshold: 14.5 |