EST details — SGN-E391443

Search information 
Request: 391443Match: SGN-E391443
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C186008Clone name: TUS-48-N22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C186008 is on microarray TOM1 spot ID 1-1-3.2.7.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77043 [cLES-1-I15] Trace: SGN-T97286 EST: SGN-E283610 Direction: 5' Facility: TIGR
Clone: SGN-C77043 [cLES-1-I15] Trace: SGN-T97287 EST: SGN-E283611 Direction: 3' Facility: TIGR
Clone: SGN-C186008 [TUS-48-N22] Trace: SGN-T192445 EST: SGN-E391119 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391443Length: 659 bp (867 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391443 [] (trimmed) CAAAAAAATAAACTAAAATTTCATATCACATTAAATTCAAAATCCACATTTACTGTTAACGGCGTTACCCTAACAAATTCATCTTAAAGTTTATC
CTTACGGTTTCTCCGTCTATCATCAGTTAAAGGTAAAAACTATATCCTATAAAGGGGACGCACTATAATCCCGTGCACCTCACCTTTATCACCCG
CTAAAAAGGGATAGTAAAACAAAAACTAAAAAGAGCCTACTTGCTGGTAGTCATCATCTTCTTAAACTCTTCAAAGCTAACGTAACCGTCCCCGT
CGGAATCAACGGAGTTGATCATTTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACACAATATGATATATATTGTACAACAAAACTTT
ACTTCATGACCAACCTTTCAAAGAACGTAAATGAAGGGTTTTATTCATACTTGTTACAAGCAAAGGGTCTTAATTAATTACCAAAATTATTATTA
TCTTGTCCCTTATTTTCAAAATTTTACAATAATAATAAATACCCATAATTAACCCCTATTTAATTATTTATTTTTGAGTCGGGGCACCAACATAT
TCTTCATAAAAGCACCATTATTTTTTGCATCCATATTTGTATTTTTTGCACCAACTGTAACTTTTCTTACTTTTGCCATACCCCTTGCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391443] SGN-U578135 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192769 [Download][View] Facility Assigned ID: FA0AAD36DG11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.908 Expected Error Rate: 0.0179 Quality Trim Threshold: 14.5