EST details — SGN-E391473

Search information 
Request: 391473Match: SGN-E391473
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185903Clone name: TUS-48-J13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185903 is on microarray TOM1 spot ID 1-1-4.2.7.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18204 [cLED-22-G7] Trace: SGN-T54244 EST: SGN-E238178 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E391473Length: 411 bp (905 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391473 [] (trimmed) TTAAAAAAAAAAAGAACATTTTATAGCTAAATAATTAAACGCAATGGCTTCCTCAATTGTCTCATCGGCAGCCGATGCTACCCGTAGAAATGTTG
CTCAAGCTAGCATGGTCGCACCCTTCACCGGACTCAAATCCGCCGCTTCTTTTCCCGTTACCAAGAAGAACAACAACGTTGACATTACCTCCCTT
GCTAGCAATGGTGGACGCGTTAGATGCATGCAGGTTATTCAAAAATAAGTGATTCAATTATCAGTATGTATATATAATTTAAATTCAACGCGATT
ATTTTATAATCGTGGAATGTTTGACTAATGTAGGTGTGGCCACCAATCAACTTGAAGAAATACGAGACATTGACATACCTTCCTGACTTGCCCGA
TGAGCAATTGCTTAACGAAATTGAATATCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391473] SGN-U577820 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192799 [Download][View] Facility Assigned ID: FA0AAD36CE07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0162 Quality Trim Threshold: 14.5