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EST details — SGN-E391527

Search information 
Request: 391527Match: SGN-E391527
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173539Clone name: TUS-16-G9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173539 is on microarray TOM1 spot ID 1-1-8.3.18.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3349 [cLEC-20-E3] Trace: SGN-T27565 EST: SGN-E205783 Direction: 5' Facility: TIGR
Clone: SGN-C173539 [TUS-16-G9] Trace: SGN-T192854 EST: SGN-E391528 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391527Length: 696 bp (881 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391527 [] (trimmed) AATAAGGATCAAATCAATTGAATGTATGTAATTCTTAGCTTCACACCCAAATTGTGTACTCATCCTTTTACTTTTAAGCACTGTTTTTCCCACTC
ACTATCTGATGTGGGACAATGTCTCCATATAATTCATCAAGTTAACTACTCTTAATAAGCATCCAAACCAATAAATTATTTCACTTCACAACTAT
TAATAAGGATCAAGTGTTTGGCTAATTCCCTACCAGTTTTGACCAATAACTTAGATTCTTCAGCTCCAAGTGGCTATCAGAATCTCTCCAAAATT
TGATAATATGAAGGCTCTCTTCTTCAGTTGATCTTTGAAGGATAATTCGAGATGCATAACCCTTCTTTCTCATCTCAAGACATATTTCTGAGGGT
TTATTAGCAGTAAGCGTGACCATATATAACCAGCCTTTCTCTGACAAAAGATTGTTGGCAGCAGGCAGTATTTTATCAATAACGCTTCGACCATT
CTCCCCTCCAGCCCATGCCGAAGTGATGCCTTCAAAACCAACTTCGTCTTCAGGTGTAGGAACATAAGGAGGGTTCACAACCAGCACATCAACTG
ATCTTGCCAAGCGCTTCTCAAGTCCAGAGGTAATATCAGTGTTTACCAACTCTGCATAAACCCCATGAGCATCCATGGTCTCACGAGTCACCCTT
ATTGCATGAGGGTTGATGTCTGTTGCAATAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391527] SGN-U572612 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192853 [Download][View] Facility Assigned ID: FA0AAD4AD05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0040 Quality Trim Threshold: 14.5