EST details — SGN-E391553
Search information |
Request: 391553 | Match: SGN-E391553 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C173627 | Clone name: TUS-16-K1 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173627 is on microarray TOM1 spot ID 1-1-8.3.18.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C4019 [cLEC-23-F1] | Trace: SGN-T28308 | EST: SGN-E206349 | Direction: 5' | Facility: TIGR |
Clone: SGN-C173627 [TUS-16-K1] | Trace: SGN-T197812 | EST: SGN-E396486 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E391553 | Length: 629 bp (873 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E391553 [] (trimmed)
AAAATATAAAGGAATAATATATTATTCACAAATCAGTGTGTAGTCATTCTAAAATGAGAATATTAGCCTACGATAATGAGAGACCTAATTAAAGA
AATATACCATGCGCGAAGTGCGGACACTTTACTTAGTTCTTATATTATATACAACTTTATTTTCATTAATTGGATCTCTTTACACCAGTATGATG
CCCTTTAGAAAAAAGAACTTTTGATATCAAATTGGTAATACTAGAACCAACTTGTACAAATTACATGTCATTATTGATTATTCAATCTTCTCCAG
CAACTCGAAACCATATGCTTCCAAAATATCCAGTGCTGACTCATAGACTTCTGGATCAATAGGCCTTAATACACCATTTGCTTTAATCTTGTTTG
CAAGTAATAGCAGAGCTCCGGTGGCTGCTGGAATCCCTACTGTTAGAGCCATGGCCATGGTGGTTTTCCCGCTCTCCGTCCTCCCCATTGCCAAG
AGTGTCGATCTATGAGTTTCAGCATGGTCGTCTGGGTAATCTACTACCACTTCATGGTGTAAAAGTACCATATCCTTCTCTGTTTTTGGAGTATG
CTAATTTCTCTTCCATGCGCAAACTTGTTACTTCAAATGGAGATTTTGAAGGAAGATGG
AATATACCATGCGCGAAGTGCGGACACTTTACTTAGTTCTTATATTATATACAACTTTATTTTCATTAATTGGATCTCTTTACACCAGTATGATG
CCCTTTAGAAAAAAGAACTTTTGATATCAAATTGGTAATACTAGAACCAACTTGTACAAATTACATGTCATTATTGATTATTCAATCTTCTCCAG
CAACTCGAAACCATATGCTTCCAAAATATCCAGTGCTGACTCATAGACTTCTGGATCAATAGGCCTTAATACACCATTTGCTTTAATCTTGTTTG
CAAGTAATAGCAGAGCTCCGGTGGCTGCTGGAATCCCTACTGTTAGAGCCATGGCCATGGTGGTTTTCCCGCTCTCCGTCCTCCCCATTGCCAAG
AGTGTCGATCTATGAGTTTCAGCATGGTCGTCTGGGTAATCTACTACCACTTCATGGTGTAAAAGTACCATATCCTTCTCTGTTTTTGGAGTATG
CTAATTTCTCTTCCATGCGCAAACTTGTTACTTCAAATGGAGATTTTGAAGGAAGATGG
Unigenes |
Current Unigene builds | |||||
[SGN-E391553] | SGN-U577473 | Tomato 200607 | Build 2 | 62 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T192879 [Download][View] | Facility Assigned ID: FA0AAD4AF01FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.962 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |