EST details — SGN-E391568

Search information 
Request: 391568Match: SGN-E391568
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173675Clone name: TUS-16-M1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173675 is on microarray TOM1 spot ID 1-1-8.1.18.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C4187 [cLEC-23-N21] Trace: SGN-T28334 EST: SGN-E206375 Direction: 5' Facility: TIGR
Clone: SGN-C173675 [TUS-16-M1] Trace: SGN-T192893 EST: SGN-E391567 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E391568Length: 659 bp (850 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391568 [] (trimmed) TGATGATTCATTCTTTGTACAAAAAGATCGGGAAAAAAAAAGTTCAGTTTTTTATCTTTGGTATTTCACTTTTTGGGTCGTTTTCAAATTTTTAA
GAAAATGCAAGTAATACCCAAATGGCGTAATGTTTTGATCTTGAAGAATTCACTTATTCAATCCACAAGAATAGTATCTTCTACACAATCACAAA
ATACCCATTTGAGCTCTTTCCATTCGACCTCAATATGCTTTGAGAAATGGAAAAATAAGTGGAATTCTGATTTTAGAGGAAGTCAGCAGCCAACT
AAGAATTATATCAGATATGAAACACGTCAAAAGCGTGCTGACTCAAAAAAAGCTTTGAAAAATCTTCTCTTTTATGGGGCATCTGGAAACTCTTT
TGAGAATGAATCTTCAACAATAAATGATAGATGGGATATGGATCGGGATGATCGTTCAGAGAAGAAAAGTGAATATAAGTCCGCTGCTCGTCTTA
GAGATCGCTCAAGGAGAAGGATGCGAAAAATGAAGAAACGGAGATTATATGAAGAATTCGATGAATATCCTGAATCAGTATTCGAAGCAACTTTT
GGTGATAAGTGGTACACTTGGTCTTTTAGGCCTGGTAAATCATCTACTTTTGAAGATATGTTCTCCCGAAGACAAGAAACAGACTGGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391568] SGN-U583864 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192894 [Download][View] Facility Assigned ID: FA0AAD4AG01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5