EST details — SGN-E391926
Search information |
Request: 391926 | Match: SGN-E391926 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C177652 | Clone name: TUS-27-B18 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177652 is on microarray TOM1 spot ID 1-1-7.2.6.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C46851 [cLEI-13-O13] | Trace: SGN-T82568 | EST: SGN-E268507 | Direction: 5' | Facility: TIGR |
Clone: SGN-C177652 [TUS-27-B18] | Trace: SGN-T197832 | EST: SGN-E396506 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E391926 | Length: 633 bp (868 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E391926 [] (trimmed)
TAGTAAATGTGTGGTACATTTCAAGTAAAACAACAAAATGTCAAGAAAAAGGTAACTCACTATTGGCAAATTCCTTTCATTTCAACAATAGTAGA
ATAACCATAAATAGTTCAACTACAAAACATCTCAGAGTCCAACAATCATTCAAATATCCCATTGAAGATTGAAAATCCACAAAACTTGAGTTCAT
CTCAACATCAATAACAAACTTGAGTTCTTGTTCACATTGTTTTACCCCAAACGGAACATCGATTGTTGACACCAAACCATAAGAGTAACATAAAT
TTTGATTCCCCCATGCCCCAAATCTCCTTCCCATTTTCCTATAAAACCATTGAGAGAATTGAAGTTCACCTGTTAGATTGTTACCATATAGGTAA
ATAGCACTTACATTAGGCAAATCTTCAAGATTCTTTGGGATTTTACCATTGAGTTTATTGTCATTAAGTCCCAAAAATCTTAACTTTTTTAACTC
TGCTATAGACTTAGGTATCTCACCTGTCAAATTCATGTTTGACAAATCCAAAGTTGTTAACTTTATCATGTTATACCAATCAAGAACATCCAAGA
ATCCACCCACTGGGTTGGTTTGACAAGACTAACTCCTCCAAACATGTCATTTCTTGAATTGAC
ATAACCATAAATAGTTCAACTACAAAACATCTCAGAGTCCAACAATCATTCAAATATCCCATTGAAGATTGAAAATCCACAAAACTTGAGTTCAT
CTCAACATCAATAACAAACTTGAGTTCTTGTTCACATTGTTTTACCCCAAACGGAACATCGATTGTTGACACCAAACCATAAGAGTAACATAAAT
TTTGATTCCCCCATGCCCCAAATCTCCTTCCCATTTTCCTATAAAACCATTGAGAGAATTGAAGTTCACCTGTTAGATTGTTACCATATAGGTAA
ATAGCACTTACATTAGGCAAATCTTCAAGATTCTTTGGGATTTTACCATTGAGTTTATTGTCATTAAGTCCCAAAAATCTTAACTTTTTTAACTC
TGCTATAGACTTAGGTATCTCACCTGTCAAATTCATGTTTGACAAATCCAAAGTTGTTAACTTTATCATGTTATACCAATCAAGAACATCCAAGA
ATCCACCCACTGGGTTGGTTTGACAAGACTAACTCCTCCAAACATGTCATTTCTTGAATTGAC
Unigenes |
Current Unigene builds | |||||
[SGN-E391926] | SGN-U576476 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T193252 [Download][View] | Facility Assigned ID: FA0AAD15DA09FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.925 | Expected Error Rate: 0.0043 | Quality Trim Threshold: 14.5 |