EST details — SGN-E392085

Search information 
Request: 392085Match: SGN-E392085
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176835Clone name: TUS-24-P17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176835 is on microarray TOM1 spot ID 1-1-8.4.9.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176835 [TUS-24-P17] Trace: SGN-T193168 EST: SGN-E391842 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392085Length: 483 bp (853 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392085 [] (trimmed) AAGTAAAAAGCATACTACTTTCTAATAAAACATTAACTTGAATTATACATAATGCTCGTGAACTGTTCTTTTAGTTGAGTAAAAGGCATACTACT
TCGTAAATTAACATCAGCTTGAATTATACAACAAGTTGAAGAACAAGAAAAAAAGGAGAAACCTTGAAGCCTCTATAAACAAGACCCTTTTCATG
CAGCTTAGCAAAAACCCACCAAAGACTCTCCATATACTTCAAATCCATAGTCTTATACCCATTCTGAAAATCAATCCATCTCCCCATTCTCACCA
CAGTTTTTTCCCATTCTCCAACATACCTTGTCACAATAGCTCTACATTCCTCATTATACTTATCAATCCCCATTTCAATCACTTGTTGTTTAGTC
TTAATCTGAAGTTTCTCATCAATTTCATGTTCAACTGGTAATCCATGACAATCCCACCCAAATCTTCGGGTCACATGAGGACGCGGGCGTTGATT
GATACCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392085] SGN-U567896 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193411 [Download][View] Facility Assigned ID: FA0AAD12CH09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.907 Expected Error Rate: 0.0002 Quality Trim Threshold: 14.5