EST details — SGN-E392085
Search information |
Request: 392085 | Match: SGN-E392085 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C176835 | Clone name: TUS-24-P17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176835 is on microarray TOM1 spot ID 1-1-8.4.9.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C176835 [TUS-24-P17] | Trace: SGN-T193168 | EST: SGN-E391842 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E392085 | Length: 483 bp (853 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E392085 [] (trimmed)
AAGTAAAAAGCATACTACTTTCTAATAAAACATTAACTTGAATTATACATAATGCTCGTGAACTGTTCTTTTAGTTGAGTAAAAGGCATACTACT
TCGTAAATTAACATCAGCTTGAATTATACAACAAGTTGAAGAACAAGAAAAAAAGGAGAAACCTTGAAGCCTCTATAAACAAGACCCTTTTCATG
CAGCTTAGCAAAAACCCACCAAAGACTCTCCATATACTTCAAATCCATAGTCTTATACCCATTCTGAAAATCAATCCATCTCCCCATTCTCACCA
CAGTTTTTTCCCATTCTCCAACATACCTTGTCACAATAGCTCTACATTCCTCATTATACTTATCAATCCCCATTTCAATCACTTGTTGTTTAGTC
TTAATCTGAAGTTTCTCATCAATTTCATGTTCAACTGGTAATCCATGACAATCCCACCCAAATCTTCGGGTCACATGAGGACGCGGGCGTTGATT
GATACCTG
TCGTAAATTAACATCAGCTTGAATTATACAACAAGTTGAAGAACAAGAAAAAAAGGAGAAACCTTGAAGCCTCTATAAACAAGACCCTTTTCATG
CAGCTTAGCAAAAACCCACCAAAGACTCTCCATATACTTCAAATCCATAGTCTTATACCCATTCTGAAAATCAATCCATCTCCCCATTCTCACCA
CAGTTTTTTCCCATTCTCCAACATACCTTGTCACAATAGCTCTACATTCCTCATTATACTTATCAATCCCCATTTCAATCACTTGTTGTTTAGTC
TTAATCTGAAGTTTCTCATCAATTTCATGTTCAACTGGTAATCCATGACAATCCCACCCAAATCTTCGGGTCACATGAGGACGCGGGCGTTGATT
GATACCTG
Unigenes |
Current Unigene builds | |||||
[SGN-E392085] | SGN-U567896 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T193411 [Download][View] | Facility Assigned ID: FA0AAD12CH09FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.907 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 14.5 |