EST details — SGN-E392131

Search information 
Request: 392131Match: SGN-E392131
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176650Clone name: TUS-24-H24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176650 is on microarray TOM1 spot ID 1-1-1.4.9.19 [Order] [Tomato Microarray Database]
See unigene SGN-U580346 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C27188 [cLEF-42-M8] Trace: SGN-T60596 EST: SGN-E247552 Direction: 5' Facility: TIGR
Clone: SGN-C176650 [TUS-24-H24] Trace: SGN-T199163 EST: SGN-E397837 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392131Length: 645 bp (830 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392131 [] (trimmed) GGTCTTAATAACAGAAGATTGAATTATAAAACTGCATAGGCAAACATGCCGGTAATGCTTGAACAATTTTATACATTGACTGGGAAATCTTATAA
CAATATCAACCTTAAGCACATAACGAGTTAGTCCAAGATGAATTAAGCAGCACTTTAATTCATGTGTTAATGACTATCCTCTTCTTCACAGAATT
TTGTGTACTCTTTCGATCCCATCAAAGATTCTAGTTCTGATGGGCTGCTTGGCTTCACTTTAATCATCCATCCATCTTCATATGGGCTCGAATTT
ATCAAGCCGGGCGTTTCAGAAAGCTTTGTGTTGACCTCAACAATCTCGCCAGAGATAGGACAATTAATGTCACTGGTGGCTTTGACACTTTCAAC
AGCTCCAAAACTGCTTCCTTGGGAAACAGAACCACCAATATCTGGCAAATCCACAAACACAACTTCTCCGGGAGGGTCCTGAGCATGATCAGTGA
TGCCAACTGTGGCCACTGAACCCTCATGCTTCACCCATTCATGTGAAGATGCATACTTCAACCCATCAATTACAGTTGAAAAACATCTGGAGATA
GAAAAGGAAGGGGCAATTATATTGTTAGTTGTGGAGATTCTTAGTGCGTTGGCTGTTGAAAAACCCCCCATCCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392131] SGN-U580346 Tomato 200607 Build 2 87 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193457 [Download][View] Facility Assigned ID: FA0AAD12DD12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0109 Quality Trim Threshold: 12.5