EST details — SGN-E392515

Search information 
Request: 392515Match: SGN-E392515
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181141Clone name: TUS-36-D3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181141 is on microarray TOM1 spot ID 1-1-6.4.15.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17048 [cLED-18-H16] Trace: SGN-T53331 EST: SGN-E238028 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392515Length: 636 bp (835 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E392515 [] (trimmed) GGGCCATGCATGTAAAACATGGGGAATATTTCAAGTTGTTAATCATGGAATTTCTTTAAAATATTTTGATGAAGTTGAATCTCAGGCAAGGCGAC
TTTTTGCCTTGCCTACTGAACAAAAGGTGAAGGTCGTAAGATCAACTAATGGTGTCACCGGCTATGGCACAGCTCGAATTACGCCGTTTTTCTCA
AAGTTCATGTGGCATGAAGGGTTCACAATTGTGGATTCACCACTTGATCATGCTAAGGAACTTTGGCCAAATGACTATAAGAAATTTTGTGATGT
GATGGAAAATTATCAAACGAAGATGAAAGTTCTATCCTTCCAACTCTGCATGTTCATCCTCAACTACTTACAACCATCTCATGAACATTCAATTA
ATTCATTTGAATTTGAAGGAGCCCTACAGTTAAATTCATATCCATGTTGTCCTAACCCTTACCACGCACTGGGGTTAGCTCCTCACACAGATTCC
TTATTCCTAACAATACTCCATCAAACAAATAATACAAAGGGTCTTCAAATCTTGAAAAAAGACCAAGGATGGACTTCAATTGCTCCGGTTTCCAA
CGATGCCCTCATTGTTAATGTAGGCGATCTTCTTCATATACTCTCTAATGGTGAATTTCCATCGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392515] SGN-U574683 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193841 [Download][View] Facility Assigned ID: FA0AAD24CB02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5