EST details — SGN-E392547

Search information 
Request: 392547Match: SGN-E392547
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180848Clone name: TUS-35-G22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180848 is on microarray TOM1 spot ID 1-1-3.3.17.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64248 [cLEM-5-J13] Trace: SGN-T85244 EST: SGN-E271439 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E392547Length: 592 bp (823 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E392547 [] (trimmed) CAGATTGCATCACTACCGAGTGAGATGGACAATGAAGTGGGCAGAGCGGATCCTGAAACATCTGCTGCTCCCTTGGATACAGATGCAAGAATATC
TACTGTTAACATATGTCATGAAGAAACTCCTACTCCGGAGGATAACCAGAATCAAAGCTCTGACACATATGTTGCTCAAGAAGCAGGGCATATTG
AAGCAGACACAAAAGCAGAGACGGGGATGATTGATGGAGAAACAGATGCAGAAAATCTAGATACAGCAGGATAATCCAAGTGTGTATTGGATTGT
GCACCATGCCGGTGTAACTTGTGTCAACAATCCACTTAATCTGGGCTCAATTTGTACCATGTAACTTAAGTCAGTTGCTTAAGAAGCTTGACAGC
AAAAAAAAAAATAAATTAAAAATTACACTATTTAGAATTATTTACACATTTTTGCATAGATCTTACTTGTTGAGAGGTGGGATTTGTTGCAAGTG
AGATTGAAGGATGGGTGTTGTGTATTAAATTATTAATAATACCTCTTTTTATGTTTGTTTGGTTGATTACACAAGTTCTATTTCTTGTTGATTCT
CTATTTATGTAATAATTGTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392547] SGN-U567368 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193873 [Download][View] Facility Assigned ID: FA0AAD23BD11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0231 Quality Trim Threshold: 12.5