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EST details — SGN-E392622

Search information 
Request: 392622Match: SGN-E392622
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180912Clone name: TUS-35-J14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180912 is on microarray TOM1 spot ID 1-1-3.2.17.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1233 [cLEC-11-F9] Trace: SGN-T25729 EST: SGN-E201782 Direction: 5' Facility: TIGR
Clone: SGN-C180912 [TUS-35-J14] Trace: SGN-T193698 EST: SGN-E392372 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392622Length: 402 bp (866 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392622 [] (trimmed) TCTATTTTAGATAGTTATGTTGACTTTTTTAAATTTCATATCGATTCAAAATCAGACAAATAAATTGACTCGTACAAAAATTTATCCACTCTTAA
ATTGATACATCCACCTCTACCAACCTCTATAAACACCTCACCCACCTAACACAACAAATAGGCAAAAAAATAAACATAGTATTATTATATTGACA
CCAACTTTAACAAAACCAACAAAATTCTTTGGAGGGTATTAAGCCGTCGCTTATCTTCATCTTCTTCCTCTGATTCTGTACATTTTTCTCACCGG
AAAACTCATCAGAAATGGATCCAAAGAATCTTTTTTTTTATAACTCATAAGCCCATACCCCTCATTAAGAACAAAAGAAAACACCCCTTTTACCG
ATAGCTCCAATTACACTTGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392622] SGN-U591122 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193948 [Download][View] Facility Assigned ID: FA0AAD23DE07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.889 Expected Error Rate: 0.0086 Quality Trim Threshold: 14.5