EST details — SGN-E393045
Search information |
Request: 393045 | Match: SGN-E393045 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C181538 | Clone name: TUS-37-D16 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181538 is on microarray TOM1 spot ID 1-1-1.4.12.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C143002 [cTOF-21-G16] | Trace: SGN-T158000 | EST: SGN-E344719 | Direction: 5' | Facility: TIGR |
Clone: SGN-C181538 [TUS-37-D16] | Trace: SGN-T194370 | EST: SGN-E393044 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E393045 | Length: 533 bp (862 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E393045 [] (trimmed)
GAAGGAAATGGGTTTAAAAGGCAAGTTGATCTCTCAAATAGAAACGAAGTGTTCTGGACATTTGCTTCATGAGCACTTCAAATCAAATCCACACA
AAACATCCGCCATGGCTCCTGATAAAATAACAAATTTTACACTTCATGAAGGTCAATTAGGAAAAACTAACTCTGTTGTTAGCTGGAATTATATT
CTTGGAGGAAAAGAGAGGCATGCCAAACAAGTCCTACACATAGACGATGAGGAAAAATCAATCACTTTCAACTTTAAAGAAGGATATATGAATGA
ACTATACAAGTCAATGACACTGACACTTACATTGATTGCAGAGAAAAACTTTATCACTTGGACTCTTGTGTATGAGAAATTGAATGAAAATACTC
CAGAGCCCTTGGATTTTATAGAGTTTCTTATCTATCTCATCAAGGACCTTGAGACTCACCATGTTGGGAAATAAATATCATTCCCCATTACTAAT
AAGATGATGAAGTATCATGACTATCCTAAATATTTGTTAATAAAATAAACCTAACTTG
AAACATCCGCCATGGCTCCTGATAAAATAACAAATTTTACACTTCATGAAGGTCAATTAGGAAAAACTAACTCTGTTGTTAGCTGGAATTATATT
CTTGGAGGAAAAGAGAGGCATGCCAAACAAGTCCTACACATAGACGATGAGGAAAAATCAATCACTTTCAACTTTAAAGAAGGATATATGAATGA
ACTATACAAGTCAATGACACTGACACTTACATTGATTGCAGAGAAAAACTTTATCACTTGGACTCTTGTGTATGAGAAATTGAATGAAAATACTC
CAGAGCCCTTGGATTTTATAGAGTTTCTTATCTATCTCATCAAGGACCTTGAGACTCACCATGTTGGGAAATAAATATCATTCCCCATTACTAAT
AAGATGATGAAGTATCATGACTATCCTAAATATTTGTTAATAAAATAAACCTAACTTG
Unigenes |
Current Unigene builds | |||||
[SGN-E393045] | SGN-U564604 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T194371 [Download][View] | Facility Assigned ID: FA0AAD25DB08RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.923 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |