EST details — SGN-E393240

Search information 
Request: 393240Match: SGN-E393240
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181890Clone name: TUS-38-C8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181890 is on microarray TOM1 spot ID 1-1-1.3.10.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6467 [cLEC-35-I17] Trace: SGN-T30781 EST: SGN-E210433 Direction: 5' Facility: TIGR
Clone: SGN-C181890 [TUS-38-C8] Trace: SGN-T194783 EST: SGN-E393457 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E393240Length: 412 bp (916 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E393240 [] (trimmed) CAGATTATGTCTAGCCAAAAATTTGTTCGTCCAATTTTTGACAATCCATTTTTGAACATTGAAGAATTACCAAATGATACAATTAAACGTCAACC
TGAACCCCTCACACAAGCCAATTTTGATCCCAATGGTACTTCTTTAGTCATATCTAAGGATGTAGACCTAGACAGCAATAAAAAAACATGGATGA
GAATCTACGTACCACGACGAATAATTGCAAATCATGACGATGATAAATTGCCAGTTATTTTCTACTATCATGGCGGAGGCTTTGTCTTCTTTCAT
GTTAATAGTTATGGTTCGGATCTATTTTGTCAACAACTATCTGAGAAACTTGACGCGATGATTATTGCCCTTGAATATCGTTTGGCCCCTGAAAA
TCGACTTCCGGCAGCTTACGATGATGGCATAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393240] SGN-U578033 Tomato 200607 Build 2 77 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194566 [Download][View] Facility Assigned ID: FA0AAD26BB04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0027 Quality Trim Threshold: 14.5