EST details — SGN-E393243

Search information 
Request: 393243Match: SGN-E393243
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181896Clone name: TUS-38-C14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181896 is on microarray TOM1 spot ID 1-1-3.3.10.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6531 [cLEC-35-L20] Trace: SGN-T30742 EST: SGN-E210394 Direction: 5' Facility: TIGR
Clone: SGN-C181896 [TUS-38-C14] Trace: SGN-T194570 EST: SGN-E393244 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E393243Length: 578 bp (863 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393243 [] (trimmed) AAACCAAATAAGAATTTTATAGTAACTAAGGGACCAAGAAAGCAATTGCACACAACTGAATTAAGAGGTAAAAGGCCTCTCCTCATAAAGTAGAT
CATCAGGCACAGGTGGAGAATCGAACCCTCACCGAATTTAGACAGCAACCAACCAAATAAGTTACTATAATTCCCGATACAAAACTAATCTTTAG
AAGAAAAAAAAGACAGGATAAAATACAAGTATATGACTCATTCCCCATGTCATCAAAATTTGTCATTTTGCCCACATCAGGGGGACACAGTTATC
CTTACTCTTAAATCTCGAGACAATTGAGCACTGATATTTTGAATCATTTGATGAGAAAAGTGGAAGCATCACTAATTGCCACTTTCTTAAATAAT
GTTGGAGCAGTAGAAATATTTCCTCTAGTAGCTAGCTGATGAGACAAAATCATCATTCTTCATGGCAGCTCTATGGGCCAGAAATTGCTTTGTAC
CCTTCTTTCTCCAGAACTTTAGCTATGGATATGTCTCCAGTCTTCACGATTCTCCCTTTCTCCATGATATGGATATACGTCGGCTTGATGAATTC
TAATAATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393243] SGN-U582143 Tomato 200607 Build 2 49 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194569 [Download][View] Facility Assigned ID: FA0AAD26BB07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5