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EST details — SGN-E393251

Search information 
Request: 393251Match: SGN-E393251
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181944Clone name: TUS-38-E14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181944 is on microarray TOM1 spot ID 1-1-3.1.10.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6788 [cLEC-36-M17] Trace: SGN-T30951 EST: SGN-E207363 Direction: 5' Facility: TIGR
Clone: SGN-C181944 [TUS-38-E14] Trace: SGN-T194791 EST: SGN-E393465 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393251Length: 427 bp (897 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E393251 [] (trimmed) AGCAACAAATAATACTCAAACCTATCTTTCACACGTTAAAATTTCAAAAGAATCTTCAATAAACAAACATATTACAAAGTGCCCTCCAACTTCAG
CTTTCCATTTCCTTGAGCTCATTTTTATGAACCACAACAAGCTGATTTCTGGGAAGTTTGACTACCTCCAGCTCCTGCTTCTGGTTGATTAATCT
TGAGTGTTGACGGCTCGGCCTTGGAGTCTGTGTCTGCAAGCCTTTGTTTTATATCTCTTGCTATTGAGAAGAAAACTTGTTCCACGTTTTTATTT
GTCTTTGCCCTAGTTTCAAAAAACTTAATTCCGTACTCATCTGCAAGTGCTTGACCCTTTGCTGTAGGGACAGCCCTCTTGCTTTCATCCATGTC
GGCCTTGTTCCCTACAAGAATTTTGTTAACATTGTCTGATGCATGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393251] SGN-U578498 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194577 [Download][View] Facility Assigned ID: FA0AAD26BC07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0085 Quality Trim Threshold: 14.5