EST details — SGN-E393368

Search information 
Request: 393368Match: SGN-E393368
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181957Clone name: TUS-38-F3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181957 is on microarray TOM1 spot ID 1-1-6.2.10.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C87443 [cLET-4-J6] Trace: SGN-T103429 EST: SGN-E289758 Direction: 5' Facility: TIGR
Clone: SGN-C181957 [TUS-38-F3] Trace: SGN-T194447 EST: SGN-E393121 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393368Length: 422 bp (842 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393368 [] (trimmed) GCGGATAAATTATTTTTTGTGTGATTATTTGCACTCCAAAGTTTGATCTACAACAATGATGTAAAAGTGGAATACACTCAACTAATGCCATGATT
TAGGCCTAGGTAAAAAAATGTGTCACTCAGAGTCTCAATTTAGAGCATATTTTCCTATATTATTCATCCCTTCAGATCCTGTGCAGAAGTTCAAA
TTAAACATCATGAAATAGTCTTCTGATATGATCCACAGTTGCAGGCATCAACGTCACAGGGCATCGCTTATACTGAGAGACATATCGGAAAACGC
AGGAATAGCAGAAGACTAATCCTGAAACTGCCACCACTGAGGGATTTGCACGCTTTTGTGAGCACAAAGGACACAGTGTTCTGTCTGTAGGTAGT
GGAATTCCATCTTTCGCAACCTTTGGAGGTGGAGGAGGGGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393368] SGN-U575082 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194694 [Download][View] Facility Assigned ID: FA0AAD26CC02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0013 Quality Trim Threshold: 14.5