EST details — SGN-E393369

Search information 
Request: 393369Match: SGN-E393369
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181961Clone name: TUS-38-F7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181961 is on microarray TOM1 spot ID 1-1-2.2.10.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C87557 [cLET-5-C14] Trace: SGN-T103500 EST: SGN-E290052 Direction: 5' Facility: TIGR
Clone: SGN-C181961 [TUS-38-F7] Trace: SGN-T199325 EST: SGN-E397999 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393369Length: 317 bp (883 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393369 [] (trimmed) AGTAAACAATCAAATATCATTAATATAGTTCTTGTAAACTTGATTGCTTTTCGAATTAATCATACACGGAATAAAAAGATGGAAAACAAGGGAAA
ATGAATACAATTTCTCAAGGGAAAACCCAAAGGAGAATTCAAACAAACTGTCCCTATAAACATAGGGCAATTAGTTTTTCTAGAACTTAGTATCC
TTCGGGCTTGTAAGCGATGAAACTGATGCACTGCACTTGACGAACATTGTCGAATCCGATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTG
CCTCCTGCACCTCAGCCAAGACCTGGGTTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393369] SGN-U580869 Tomato 200607 Build 2 1124 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194695 [Download][View] Facility Assigned ID: FA0AAD26CC04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.945 Expected Error Rate: 0.0079 Quality Trim Threshold: 14.5