EST details — SGN-E393386

Search information 
Request: 393386Match: SGN-E393386
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182059Clone name: TUS-38-J9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182059 is on microarray TOM1 spot ID 1-1-8.2.10.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C79943 [cLET-10-L15] Trace: SGN-T104925 EST: SGN-E290756 Direction: 5' Facility: TIGR
Clone: SGN-C182059 [TUS-38-J9] Trace: SGN-T194466 EST: SGN-E393140 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E393386Length: 688 bp (848 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393386 [] (trimmed) TTCGTTTGTAATCCATTTCACAAATCGGACAATTAAGAGATAAGTTCAAATCATACAAAAATTGACCAGGGGAAACGTGAAGTTTCCTTTTCGTC
ATCATCAAGTAATGTATGGAAGAGTAATTTCCCATACAGTAGATGATACAAGCATAGTATATATATATATAGCATGTTATATGCCCATGCAACAT
GGTATATAACTGTGTGCTTTGCAGTATTAGACAAAATATGGTATATTAGTATGAGAAATGTAATGTTGACGGTCATTCACGACTTGAGGAAGATG
GAAAGACTATCATCTCCTCAGGCTCTCCACAATGTAGTCTGCATACAGATCCTGGGAATGCTGGACTGCTTCAAAGGCTTTGTCGGAGGGAAGAA
AGTCATTAACAGCAACTTCCTTGTTCTCATTTTTCTTGTAATCCTCAAAGAAGCGACGTATCTCAGCCAAACGATGGGGTGGCAGCTCATTGATA
TCAGTATAGTGCTTGTATTCAGGATCATCAGCACAGACAGCAATTATCTTGTCGTCCTTTTCTCCCTGATCAATCATGGGCATAAGACCAATTGC
TTTAGCCCTGAGAAAGCAACCCGGAAGAATAGGTTCCTGCATGATGACTAAGACATCCAGAGGGTCACTGTCATCACAGAGTGTACGAAGGATGA
ACCCATAGTTATGGGGGTATACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393386] SGN-U568784 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194712 [Download][View] Facility Assigned ID: FA0AAD26CE05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5