EST details — SGN-E393472
Search information |
Request: 393472 | Match: SGN-E393472 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C181990 | Clone name: TUS-38-G12 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181990 is on microarray TOM1 spot ID 1-1-5.3.10.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C7120 [cLEC-37-N4] | Trace: SGN-T31290 | EST: SGN-E208299 | Direction: 5' | Facility: TIGR |
Clone: SGN-C181990 [TUS-38-G12] | Trace: SGN-T194584 | EST: SGN-E393258 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E393472 | Length: 665 bp (881 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E393472 [] (trimmed)
AAATCCTTTTTCCTCTTAAATAGCTTCAAAAGGCATTTCCGTACAGAAAATATGGATGAAAAAGTAGCATCTTCTTGTGCTGAATAAACTTAAAG
AATGGGAACTCATTTACACGTCACACATGAGGATGGAAAAAGATTTGCTACCAGCTCAAATAACAAGCAACAAAACTAGCTCTTCAAGCTTTATC
AATTGGAAGCTATATAAGTGAAAGATCACCAGCAGGAATGGATCTCTTGACAAGCTTTGCCCAAAACTCGTTGGTTTCCATAATAACCTTAAGTG
CATAATCCTTGTTAGCTGGCTTGTTCCCAAGTCCAAACTTGTTTGCAGGCTTCCCATCAGGAATCTTATAGTCTCTAAACCAGTCCATGATAGCT
GTCAAAGTGCCCGGGAAATGCTTCTCAACATCATCAATATCATTGACAAGTGAAGCTCGGGGATCATCTAAAGATATAGCAACTATTTTCCAGTC
AAGTTCTCCTTCATCAATCATTGCCAAAGCAGCTAAAGGTTTGACCTTCAAGACCTGGCCCATTTTAGCACGACTTTCCCCAATCTCGACAAACA
TCAACAGGGTCATTATCTCCAAAATGCCCCCTCAATTTCAGCATTTGCCAATGAAGGGTCTTCCCAGGTTTGAAGAAACAACCCTAGTTTCCAGT
AATGGGAACTCATTTACACGTCACACATGAGGATGGAAAAAGATTTGCTACCAGCTCAAATAACAAGCAACAAAACTAGCTCTTCAAGCTTTATC
AATTGGAAGCTATATAAGTGAAAGATCACCAGCAGGAATGGATCTCTTGACAAGCTTTGCCCAAAACTCGTTGGTTTCCATAATAACCTTAAGTG
CATAATCCTTGTTAGCTGGCTTGTTCCCAAGTCCAAACTTGTTTGCAGGCTTCCCATCAGGAATCTTATAGTCTCTAAACCAGTCCATGATAGCT
GTCAAAGTGCCCGGGAAATGCTTCTCAACATCATCAATATCATTGACAAGTGAAGCTCGGGGATCATCTAAAGATATAGCAACTATTTTCCAGTC
AAGTTCTCCTTCATCAATCATTGCCAAAGCAGCTAAAGGTTTGACCTTCAAGACCTGGCCCATTTTAGCACGACTTTCCCCAATCTCGACAAACA
TCAACAGGGTCATTATCTCCAAAATGCCCCCTCAATTTCAGCATTTGCCAATGAAGGGTCTTCCCAGGTTTGAAGAAACAACCCTAGTTTCCAGT
Unigenes |
Current Unigene builds | |||||
[SGN-E393472] | SGN-U574383 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T194798 [Download][View] | Facility Assigned ID: FA0AAD26BD06FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.940 | Expected Error Rate: 0.0121 | Quality Trim Threshold: 14.5 |