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EST details — SGN-E393489

Search information 
Request: 393489Match: SGN-E393489
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182098Clone name: TUS-38-K24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182098 is on microarray TOM1 spot ID 1-1-1.3.10.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E393489Length: 269 bp (905 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E393489 [] (trimmed) CCCTTTTGACGAACTTGGAGATCTTGTATCTATCCTACAACAAGATGACAGGAGTTATACCATATAGCATTGCTCCCTTTCATAAGTTAACTTAC
TTGTATCTCGATCACAATCAATTTTCTGGGAGGATTCCAGATGCCTTCTACAAACACCCTTTCTTGAAGGAAATGTACATTGACGAGAACACATT
CCGGCCTGGTGTAAGACCAATCGGCCTGCATAAAGTGCTAGAACTTTCATACACAGATTTCCTTGTTTAGGAGAAAGCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393489] SGN-U576711 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194815 [Download][View] Facility Assigned ID: FA0AAD26BF12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0241 Quality Trim Threshold: 14.5