EST details — SGN-E393489
| Search information |
| Request: 393489 | Match: SGN-E393489 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C182098 | Clone name: TUS-38-K24 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C182098 is on microarray TOM1 spot ID 1-1-1.3.10.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E393489 | Length: 269 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E393489 [] (trimmed)
CCCTTTTGACGAACTTGGAGATCTTGTATCTATCCTACAACAAGATGACAGGAGTTATACCATATAGCATTGCTCCCTTTCATAAGTTAACTTAC
TTGTATCTCGATCACAATCAATTTTCTGGGAGGATTCCAGATGCCTTCTACAAACACCCTTTCTTGAAGGAAATGTACATTGACGAGAACACATT
CCGGCCTGGTGTAAGACCAATCGGCCTGCATAAAGTGCTAGAACTTTCATACACAGATTTCCTTGTTTAGGAGAAAGCC
TTGTATCTCGATCACAATCAATTTTCTGGGAGGATTCCAGATGCCTTCTACAAACACCCTTTCTTGAAGGAAATGTACATTGACGAGAACACATT
CCGGCCTGGTGTAAGACCAATCGGCCTGCATAAAGTGCTAGAACTTTCATACACAGATTTCCTTGTTTAGGAGAAAGCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E393489] | SGN-U576711 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T194815 [Download][View] | Facility Assigned ID: FA0AAD26BF12RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0241 | Quality Trim Threshold: 14.5 |
Working
