EST details — SGN-E393685

Search information 
Request: 393685Match: SGN-E393685
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183426Clone name: TUS-42-C8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183426 is on microarray TOM1 spot ID 1-1-1.3.2.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77072 [cLES-1-K3] Trace: SGN-T97428 EST: SGN-E283752 Direction: 5' Facility: TIGR
Clone: SGN-C77072 [cLES-1-K3] Trace: SGN-T97429 EST: SGN-E283753 Direction: 3' Facility: TIGR
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Sequence 
Sequence Id: SGN-E393685Length: 645 bp (874 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E393685 [] (trimmed) CACTTTATCTTGGCAAAGGAGAACCAATGAGCCCAGATACATGTATCTTCAACTTACATCATTTGAAAATTCAAGAGTAAACTCCTACTAGTTTG
ATAACAATTTCTAATCACCATATAACTAGCTCGAAGGTACAAAATATTGGAGGAACACCATGAATTAAGCATGATACATGCCAAAACTACTGCAG
TAAAACAGGTTCTCTAGAGTCTCATTTGAGAAAAGTACAGGACAGAAACAAGAAAACATATATGAAGAGAGACGTTAAGAGTTCAAGACTCCACG
TTGGTTGCAGCAAAAATGAAGGAATTATGGGAACCAACAGTGAACCACAAAACCAACCAGCCACAAGGCCTCCAAACCCTATAAGAGCAGCTCTA
CCTAAGCTCTTTGTCTTGTCATTAAGGAAGTATACACAAGCTCCAAATGATATTGCTACCTGGAATGCAGGGCCAGCTTCAGCAGAGTTCATCAC
ACTCCAGCATGCCATGAATCCAAAGAGGAATAATCTCCTCATGATAATTACAGGTGGTGGAAGTTCCACAAAGCTGAGGAGGTTCTGAACCCATG
GTGGAGATTCCTCGACTTGCTTTTTTAGCCTTGTTTTCAAGTTAATCTTTGTCTTCTTTCTATTTATGAAGCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393685] SGN-U565622 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195011 [Download][View] Facility Assigned ID: FA0AAD30BB04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5