EST details — SGN-E393687

Search information 
Request: 393687Match: SGN-E393687
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183428Clone name: TUS-42-C10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183428 is on microarray TOM1 spot ID 1-1-7.3.1.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183428 [TUS-42-C10] Trace: SGN-T195012 EST: SGN-E393686 Direction: 3' Facility: INRA
Clone: SGN-C183428 [TUS-42-C10] Trace: SGN-T196006 EST: SGN-E394680 Direction: 5' Facility: INRA
Clone: SGN-C183428 [TUS-42-C10] Trace: SGN-T196006 EST: SGN-E399227 Direction: 5' Facility: INRA
Clone: SGN-C183428 [TUS-42-C10] Trace: SGN-T200276 EST: SGN-E399226 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393687Length: 337 bp (871 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E393687 [] (trimmed) AATTTCTCAGAATATTACAAACACATCCATTTTCTCCATCCTCTTTCTTACTGTGAGAAAATTTAGAGAGAGAGAAGTGTATTTTGAGCTGAAAA
TTGCTAATGGCAGTTGGTAACTGAACGTTTTTATACAGGGAAATGTCTGGTAGACGATCGAGTTATACTTTGTTGAATCAAATTCCTAATGATAA
TTTTTTCCAGCCGCCGGCGCCGAAGTTCTCTGCCGGAGCTGGTGTAGTGCCGTACGGTGAGTCTAGTTCTGCTGAGAAGAACAGAGGTAAAGTAT
TTGATTTGGACTTGATGGATCATCACATGATGCAATCACAGATCCGGGAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393687] SGN-U566677 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195013 [Download][View] Facility Assigned ID: FA0AAD30BB05RM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5