EST details — SGN-E393919

Search information 
Request: 393919Match: SGN-E393919
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172862Clone name: TUS-14-K4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172862 is on microarray TOM1 spot ID 1-1- [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14164 [cLEC-7-B13] Trace: SGN-T25442 EST: SGN-E202160 Direction: 5' Facility: TIGR
Clone: SGN-C172862 [TUS-14-K4] Trace: SGN-T195393 EST: SGN-E394067 Direction: 3' Facility: INRA
Clone: SGN-C172862 [TUS-14-K4] Trace: SGN-T195393 EST: SGN-E399073 Direction: 3' Facility: INRA
Clone: SGN-C172862 [TUS-14-K4] Trace: SGN-T195686 EST: SGN-E394360 Direction: 5' Facility: INRA
Clone: SGN-C172862 [TUS-14-K4] Trace: SGN-T200217 EST: SGN-E399074 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence Id: SGN-E393919Length: 589 bp (844 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
[BLAST]  [AA Translate]
Current Unigene builds
[SGN-E393919] SGN-U571791 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
SGN-ID: SGN-T195245 [Download][View] Facility Assigned ID: FA0AAD2BF02FM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5