EST details — SGN-E394199

Search information 
Request: 394199Match: SGN-E394199
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183510Clone name: TUS-42-F20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183510 is on microarray TOM1 spot ID 1-1-5.2.1.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183510 [TUS-42-F20] Trace: SGN-T195524 EST: SGN-E394198 Direction: 3' Facility: INRA
Clone: SGN-C183510 [TUS-42-F20] Trace: SGN-T195524 EST: SGN-E399456 Direction: 3' Facility: INRA
Clone: SGN-C183510 [TUS-42-F20] Trace: SGN-T200406 EST: SGN-E399457 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394199Length: 657 bp (852 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394199 [] (trimmed) TCGATCTGCCGCAAGCCGAAAAAAACCCTAGCAGCAGAAAGGGAAGAAGCAGAGCACAACCATGGCGACGCAAGATGTAAGGACTCTTTCGACTA
AAGAAGCTGACATTCAGATGATGTTGGCTGCTGAAGTTCACCTCGGTACTAAGAATTGTGACTTCCAAATGGAGCGATACGCTTTCAAGCGCCGT
AACGATGGTATCTACATCATCAACCTTGGAAAGACATGGGAAAAGCTTCAAATGGCTGCCAGGGTGATTGTTGCTATTGAGAATCCTCAGGACAT
CATTGTTCAATCTGCCAGGCCTTATGGACAGAGAGCTGTCTTGAAATTTGCTCAATATACTGGTGCACATGCTATTGCTGGACGTCACACCCCTG
GAACTTTTACCAATCAGCTTCAGACCTCATACAGTGAGCCACGACTCTTGATTCTGACTGATCCAAGAACTGACCATCAGCCAATCAAGGAAGCT
GCACTTGGAAACATCCCAACTATTGCTTTCTGTGACACTGATTCTCCAATGCGTTATGTTGACATTGGTATCCCTGCCAATAACAAAGGAAAGCA
CAGCATTGGTGTTCTTTTCTGGATCTTACCAGGGATGGTACTCCCGAAGCGTGGGGCCATTAATCAAGGACCTAATGGGGATGTTAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394199] SGN-U579857 Tomato 200607 Build 2 163 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195525 [Download][View] Facility Assigned ID: FA0AAD30DC10RM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5