EST details — SGN-E394487
| Search information |
| Request: 394487 | Match: SGN-E394487 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C183077 | Clone name: TUS-41-D19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183077 is on microarray TOM1 spot ID 1-1-6.4.3.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C67885 [cLEN-21-O8] | Trace: SGN-T91559 | EST: SGN-E276300 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183077 [TUS-41-D19] | Trace: SGN-T195174 | EST: SGN-E393848 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E394487 | Length: 272 bp (874 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E394487 [] (trimmed)
CTAGAGTTGAGGAGAGTTATGACAAAATGAGTGAATTAAAAGCGTTTGATGATACTAAGGCCGGTGTTAAAGGACTTGTTGATTCTGGAATTACT
AAAGTACCTCAAATATTCGTTCTACCGCCAAAAGACAGGGCTAAAAAATGTGAAACACATTTCGTTTTTCCAGTGATAGACCTTCAAGGTATCGA
TGAGGATCCGATTAAGCATAAGGAGATAGTGGACAAAGTTCGAGATGCATCGGACAAATGGGGTTTTTTCGGAGGGGATAAA
AAAGTACCTCAAATATTCGTTCTACCGCCAAAAGACAGGGCTAAAAAATGTGAAACACATTTCGTTTTTCCAGTGATAGACCTTCAAGGTATCGA
TGAGGATCCGATTAAGCATAAGGAGATAGTGGACAAAGTTCGAGATGCATCGGACAAATGGGGTTTTTTCGGAGGGGATAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E394487] | SGN-U578448 | Tomato 200607 | Build 2 | 590 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T195813 [Download][View] | Facility Assigned ID: FA0AAD29CB10FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 14.5 |
Working
