EST details — SGN-E394548

Search information 
Request: 394548Match: SGN-E394548
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172761Clone name: TUS-14-F23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172761 is on microarray TOM1 spot ID 1-1-2.2.20.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172761 [TUS-14-F23] Trace: SGN-T195875 EST: SGN-E394549 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E394548Length: 379 bp (823 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E394548 [] (trimmed) GTAAAACTATTTCAAAATCATGACTGGAGGAAGAGAAATCCTGCACAAGATGAAGGAAAAGGCATGTTTTATGGCTTCCATGCCAGACTCACCAG
ATACAAGAGGCAAGGGCGGAGCATCAAAGCGGATCACTCATGGTTCCCACCTGGTGAAGGGAAAGTCTAATCACGCGATGGAAGATTGTTTAGTT
TGTGAGTTTAAGCAAGTCCATAACAACGATTTGGGACTATTCCCAATCTATGATGGACATATGGGCCATGATGTAACAAACTACTTGCAGACACA
TTTGTTTAACAATATTTTGAAAGAACATGACGTTTGGACGGATACTGTGAATGCAACTCGTAAAGCTTATCATAATACAGACAGAGACATTCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394548] SGN-U567601 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195874 [Download][View] Facility Assigned ID: FA0AAD2CC12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0071 Quality Trim Threshold: 12.5