EST details — SGN-E394680

Search information 
Request: 394680Match: SGN-E394680
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183428Clone name: TUS-42-C10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183428 is on microarray TOM1 spot ID 1-1- [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183428 [TUS-42-C10] Trace: SGN-T195012 EST: SGN-E393686 Direction: 3' Facility: INRA
Clone: SGN-C183428 [TUS-42-C10] Trace: SGN-T195013 EST: SGN-E393687 Direction: 5' Facility: INRA
Clone: SGN-C183428 [TUS-42-C10] Trace: SGN-T196006 EST: SGN-E399227 Direction: 5' Facility: INRA
Clone: SGN-C183428 [TUS-42-C10] Trace: SGN-T200276 EST: SGN-E399226 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence Id: SGN-E394680Length: 356 bp (876 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
[BLAST]  [AA Translate]
Current Unigene builds
[SGN-E394680] SGN-U572014 Tomato 200607 Build 2 91 ESTs assembled
Follow SGN-U# link for detailed information and annotations
SGN-ID: SGN-T196006 [Download][View] Facility Assigned ID: FA0AAD30BB05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0171 Quality Trim Threshold: 14.5