EST details — SGN-E394900
| Search information |
| Request: 394900 | Match: SGN-E394900 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C183869 | Clone name: TUS-43-E19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183869 is on microarray TOM1 spot ID 1-1-6.1.18.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C10738 [cLEC-6-C14] | Trace: SGN-T23950 | EST: SGN-E202289 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183869 [TUS-43-E19] | Trace: SGN-T199687 | EST: SGN-E398361 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E394900 | Length: 232 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E394900 [] (trimmed)
AGCAATTCCCTCCCTCCAATATATCCAGGTTATCTTCAGGAGCACACAGACTTAAAATAAAAAGTACTAATGGTTCAAAGAGAGAATTTTTGGGG
CTAAAGGATGCACCTGATGTTCAGATTGCTGCACATACATTTACTTTCCGTGAGCTTGCAGCTGCTACTAATAACTTCAGGCCACAATCTTTTAT
AGGGGAAGGATGATCTTAGGGACGCCATTTCACGACTCCTCG
CTAAAGGATGCACCTGATGTTCAGATTGCTGCACATACATTTACTTTCCGTGAGCTTGCAGCTGCTACTAATAACTTCAGGCCACAATCTTTTAT
AGGGGAAGGATGATCTTAGGGACGCCATTTCACGACTCCTCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E394900] | SGN-U584760 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T196226 [Download][View] | Facility Assigned ID: FA0AAD31AC10RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0102 | Quality Trim Threshold: 14.5 |
Working
