EST details — SGN-E395044
Search information |
Request: 395044 | Match: SGN-E395044 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C182830 | Clone name: TUS-40-J12 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C182830 is on microarray TOM1 spot ID 1-1-5.2.5.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E395044 | Length: 565 bp (884 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E395044 [] (trimmed)
GAAAGGTTGGGACGCGGTATTGTTACTGATGCCATAACTACCCCAGTGGTTAACACATCTGCTTACTTCTTCAACAAAACTTCTGACCTTATTGA
TTTTAAGGAGAAAAGACGTGCAAGTTTTGAATATGGCCGCTATGGGAACCCCACTACTGTTGTTTTGGAGGAGAAAATTAGTGCACTTGAGGGTG
CTGAATCAACCTTGATAGTGGCATCTGGAATGTGTGCTAGTACTGTCATGTTCCTGGCCTTGGTTCCTGCTGGTGGGCATATTGTTACTACTACA
GACTGCTACAGGAAGACACGTGTTTTTATTGAGACAATATTACCTAAAATGGGAATTACGGCCACAGTTATTGATCCAGCAGATATGGGAGCTTT
GGAGTTAGCATTAAATCAGAAGAAAGTGGATCTTTTCTTTACTGAGTCTCCAACAAATCCATTCCTGAGATGTGTTGACATTGAGCTGGTTTCAA
AGCTTTGCCGTGAAAAAGGAGCCTTGGTTTGCATAAAATGGAACATTTTGCACTCCTCTTAACCAAAAGGCCCTTGCTCTAGGGGCTGAC
TTTTAAGGAGAAAAGACGTGCAAGTTTTGAATATGGCCGCTATGGGAACCCCACTACTGTTGTTTTGGAGGAGAAAATTAGTGCACTTGAGGGTG
CTGAATCAACCTTGATAGTGGCATCTGGAATGTGTGCTAGTACTGTCATGTTCCTGGCCTTGGTTCCTGCTGGTGGGCATATTGTTACTACTACA
GACTGCTACAGGAAGACACGTGTTTTTATTGAGACAATATTACCTAAAATGGGAATTACGGCCACAGTTATTGATCCAGCAGATATGGGAGCTTT
GGAGTTAGCATTAAATCAGAAGAAAGTGGATCTTTTCTTTACTGAGTCTCCAACAAATCCATTCCTGAGATGTGTTGACATTGAGCTGGTTTCAA
AGCTTTGCCGTGAAAAAGGAGCCTTGGTTTGCATAAAATGGAACATTTTGCACTCCTCTTAACCAAAAGGCCCTTGCTCTAGGGGCTGAC
Unigenes |
Current Unigene builds | |||||
[SGN-E395044] | SGN-U578164 | Tomato 200607 | Build 2 | 105 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T196370 [Download][View] | Facility Assigned ID: FA0AAD28DE06RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0033 | Quality Trim Threshold: 14.5 |