EST details — SGN-E395147

Search information 
Request: 395147Match: SGN-E395147
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181807Clone name: TUS-37-O21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181807 is on microarray TOM1 spot ID 1-1-4.3.12.12 [Order] [Tomato Microarray Database]
See unigene SGN-U579445 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C22281 [cLED-37-I1] Trace: SGN-T58007 EST: SGN-E242186 Direction: 5' Facility: TIGR
Clone: SGN-C181807 [TUS-37-O21] Trace: SGN-T196472 EST: SGN-E395146 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395147Length: 642 bp (818 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395147 [] (trimmed) GTTAAACATGGCTTCTTCTTCTAAGTTAGTACTTGTAATGTGTTTTATGATTAGTGCTTTTGGCATTGCAATTGGGGCCAAGTTTGATCAAGAAT
TCGACATTACATGGGGTGATGGCAGAGCAAAAATACTTAACAATGGCGACCTCCTTACTCTCTCACTTGACAAAATCTCTGGCTCTGGTTTTCAA
CCCAAGAATGAATATCTGTTTGGTAAAATTGACATGCAGCTCAAACTTGTCCCAGGAAATTCTGCTGGCACTGTCACTGCTTACTATTTGTCATC
ACAAGGACCAACACATGATGAAATAGATTTTGAATTCTTGGGAAATTTAAGTGGTGATCCTTATACTCTCCATACTAATGTATTTAGTCAAGGCA
AAGGAAACAGAGAACAACAATTTCATCTTTGGTTTGACCCTACTGCTGATTTCCACACGTATTCCATCACTTGGAATCCACAACGCATCATATTT
TATGTGGACGGAACGCCAATTAGAGAATACAAGAATAGTGAATCGATTGGAGTTTCATATCCAAAGAACCAACCCATGAGGATATATTCGAGTCT
TTGGAATGCAGATGATTGGGCTACAAAAGGAGGACTTGTTAAGACTGATTGGAGCCAAGCACCCTTTAGTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395147] SGN-U579445 Tomato 200607 Build 2 169 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196473 [Download][View] Facility Assigned ID: FA0AAD25AH11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5