EST details — SGN-E395156

Search information 
Request: 395156Match: SGN-E395156
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182842Clone name: TUS-40-J24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182842 is on microarray TOM1 spot ID 1-1-1.2.5.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C129076 [cTOD-10-G8] Trace: SGN-T144269 EST: SGN-E330919 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395156Length: 650 bp (865 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E395156 [] (trimmed) GGAATAATAGGAAGCAATAACGAATTGGTCATAAAAGCCAAAGAAGAAATAAAAGTCTTCTTCAATGGCTATCTACATCAAAGCCTTTGTTCTTC
TTCCTTTACTATTTGTTTCATGTTATGCTAGAAACAAACATATCGACCAAGGCTTTGACGATGCTAACGACTCTCCCGTTGGTATCAATTTTGAT
CCTTCCCCTCATGGACTTTTGGGATTCCTAGTTGGAAAGAAAAAAAATAACAACAATAACAAGTCGAACAAGAAAAACAAAAAAAATGAATTAAT
ATTTCCACGATTTCCTTTTCCGTTTCCCTTTAATGGAGTGAACCAAAACCAAGAGGAACCAGCACCATTAGAACCGGCTGTCGAAGAGAAAAATA
ATGGCATTCCAAAGCCGGATTTTGAGACGGAAAATCGTGGTACTTGGATGATACATTCACCAAATGCTGGTGTTGCAGCCATGCATATACAATTG
ATGCCAAATAACAAGGCTGTTTGGTATGACACCACAAATCTTGGACCATCTGCAATTCAAAATAACCCTCCATTTTGCAAGCCAGTCCCAGAAAG
GCCAGGTGAGACTGATTGTTGGGTCTCATGGCGTTCAATATGAAGTTGAAAATGGTCCAAGTTTAGGAAATTGAAAGGTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395156] SGN-U582343 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196482 [Download][View] Facility Assigned ID: FA0AAD28DE12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5